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sw_6_scaffold_9863_1

Organism: SW_6_UNK

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Location: comp(3..227)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD n=1 Tax=Lewinella cohaerens RepID=UPI000376A5F4 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 75.0
  • Bit_score: 139
  • Evalue 1.70e-30
rpoD; RNA polymerase, sigma 70 subunit, RpoD subfamily protein similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 75.0
  • Bit_score: 139
  • Evalue 4.90e-31
RNA polymerase, sigma 70 subunit, RpoD subfamily protein {ECO:0000313|EMBL:AFC23526.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira. similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 75.0
  • Bit_score: 139
  • Evalue 2.40e-30

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Taxonomy

Saprospira grandis → Saprospira → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 225
ATGAGGCAACTAAAAATCACCAAATCCATCACCAATCGTGAAAGCCAATCACTTGATAAGTATTTGCAGGAAATTGGCAAAGTTGACTTACTTACCCCGGAAGAAGAAGTAGAATTAGCAAAACGGATCAAAGAGGGTGATCAAGTTGCTCTTGAACGTTTAACAAAAGCTAACCTTCGTTTTGTAGTGTCCGTTGCTAAGCAATACCAAAACCAGGGGCTCTCC
PROTEIN sequence
Length: 75
MRQLKITKSITNRESQSLDKYLQEIGKVDLLTPEEEVELAKRIKEGDQVALERLTKANLRFVVSVAKQYQNQGLS