ggKbase home page
Advanced Search
Search Help

SW_6_UNK

In projects: SW_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.55 Longest contig: 253.36 Kbp Bin length: 44.06 Mbp GC content: 60.59 %
Contigs count: 15674 Features count: 56776 rRNAs count: 17 tRNAs count: 494

Genome completeness

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 14901-14950 of 15674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_22812
Species: RBG_13_RIF03_48_7_curated (50%)
2 1310 bp 36.95 5.34 76.49
sw_6_scaffold_5759
Species: Clostridium sp. CAG:628 (50%)
2 2248 bp 27.98 5.34 97.82
sw_6_scaffold_14710
Species: Salinibacter ruber (100%)
1 1161 bp 53.06 5.34 100.00
sw_6_scaffold_13667
Species: Archaeoglobus veneficus (50%)
2 1220 bp 64.75 5.33 99.34
sw_6_scaffold_13686 3 1219 bp 54.06 5.33 35.44
sw_6_scaffold_10922
Species: Haloferax sulfurifontis (50%)
2 1427 bp 47.37 5.33 74.21
sw_6_scaffold_15306
Species: marine sediment metagenome (50%)
2 1126 bp 57.02 5.33 99.11
sw_6_scaffold_10940
Species: Fluviicola taffensis (50%)
2 1426 bp 40.88 5.33 81.63
sw_6_scaffold_8106
Species: Haliangium ochraceum (100%)
2 1763 bp 49.52 5.33 99.72
sw_6_scaffold_9968
Species: Halorhabdus tiamatea (50%)
2 2063 bp 52.11 5.33 53.08
sw_6_scaffold_16265
Phylum: Bacteroidetes (66.67%)
3 1580 bp 31.58 5.32 82.59
sw_6_scaffold_7386
Domain: Bacteria (66.67%)
3 3457 bp 51.61 5.32 79.58
sw_6_scaffold_13969 2 1202 bp 55.57 5.32 77.12
sw_6_scaffold_15628
Species: Chitinophaga pinensis (100%)
1 1108 bp 45.67 5.32 85.02
sw_6_scaffold_32007 4 1184 bp 43.07 5.32 74.07
sw_6_scaffold_13635
Species: Halorubrum saccharovorum (50%)
2 1222 bp 62.27 5.32 95.01
sw_6_scaffold_22675 2 1393 bp 50.68 5.31 66.55
sw_6_scaffold_8324
Species: Fischerella sp. JSC-11 (50%)
2 1732 bp 39.90 5.31 82.27
sw_6_scaffold_20931
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1543 bp 44.85 5.31 39.47
sw_6_scaffold_11295 3 1394 bp 37.88 5.31 94.91
sw_6_scaffold_12479
Species: GWA2_RIF03_38_11_curated (50%)
2 1300 bp 41.31 5.31 97.62
sw_6_scaffold_13881
Species: CSP1_3_Armatimonadetes (50%)
2 1207 bp 54.35 5.30 101.41
sw_6_scaffold_6620 6 2794 bp 58.91 5.30 84.29
sw_6_scaffold_9416 3 1585 bp 51.48 5.30 44.29
sw_6_scaffold_14176
Species: Aequorivita sublithincola (100%)
1 1189 bp 35.58 5.30 99.92
sw_6_scaffold_21205
Species: RIFOXYA2_FULL_RIF_OD1_01_38_24_curated (50%)
2 1772 bp 42.44 5.30 62.47
sw_6_scaffold_14542
Species: Fulvivirga imtechensis (100%)
1 1169 bp 36.61 5.30 93.67
sw_6_scaffold_12475
Species: R_WOR_2_68_15 (50%)
2 1301 bp 56.57 5.30 108.84
sw_6_scaffold_4754
Domain: Bacteria (100%)
3 2586 bp 58.31 5.30 80.39
sw_6_scaffold_16227 3 1078 bp 56.86 5.29 88.22
sw_6_scaffold_6657
Phylum: Bacteroidetes (50%)
4 2781 bp 40.49 5.29 62.68
sw_6_scaffold_6929
Species: Runella slithyformis (50%)
2 1966 bp 43.59 5.29 100.10
sw_6_scaffold_15135
Species: Candidatus Halobonum tyrrellensis (50%)
2 1135 bp 55.59 5.29 96.21
sw_6_scaffold_11927
Species: Synechococcus sp. PCC 7502 (50%)
2 1343 bp 55.92 5.29 92.70
sw_6_scaffold_17457 2 1021 bp 48.09 5.29 101.37
sw_6_scaffold_11932
Species: Prochlorococcus marinus (50%)
2 1342 bp 46.50 5.29 100.60
sw_6_scaffold_17380
Species: Candidatus Halobonum tyrrellensis (50%)
2 1023 bp 57.87 5.28 81.82
sw_6_scaffold_11195
Species: Sporocytophaga myxococcoides (50%)
2 1402 bp 43.01 5.28 77.89
sw_6_scaffold_15111
Species: Halorhabdus tiamatea (50%)
2 1136 bp 38.73 5.28 101.14
sw_6_scaffold_18607
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
1 1760 bp 56.59 5.28 53.86
sw_6_scaffold_15131
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (100%)
1 1136 bp 43.93 5.28 64.70
sw_6_scaffold_7191
Phylum: Bacteroidetes (100%)
3 1914 bp 42.48 5.28 82.13
sw_6_scaffold_16565
Species: Halovivax asiaticus (50%)
2 1060 bp 42.17 5.28 99.91
sw_6_scaffold_16580
Class: Halobacteria (66.67%)
3 1060 bp 52.45 5.28 93.96
sw_6_scaffold_10619
Order: Natrialbales (50%)
4 2255 bp 57.87 5.28 97.52
sw_6_scaffold_12961
Species: Tolypothrix campylonemoides (50%)
4 2353 bp 46.96 5.27 99.19
sw_6_scaffold_9869
Species: Halorhabdus tiamatea (50%)
2 1536 bp 43.16 5.27 98.24
sw_6_scaffold_17852 3 1005 bp 57.41 5.27 69.85
sw_6_scaffold_16963
Species: Hymenobacter sp. DG25B (50%)
2 1043 bp 40.08 5.27 100.38
sw_6_scaffold_12852
Species: gamma proteobacterium HTCC5015 (50%)
2 1272 bp 59.36 5.27 99.53
Displaying items 14901-14950 of 15674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.