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SW_6_UNK

In projects: SW_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.55 Longest contig: 253.36 Kbp Bin length: 44.06 Mbp GC content: 60.59 %
Contigs count: 15674 Features count: 56776 rRNAs count: 17 tRNAs count: 494

Genome completeness

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 15251-15300 of 15674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_23473
Species: Halorubrum aidingense (50%)
2 1455 bp 68.66 28.73 42.96
sw_6_scaffold_25695
Species: Pontibacillus marinus (50%)
2 1453 bp 61.67 9.43 42.95
sw_6_scaffold_13650
Species: Halorubrum saccharovorum (100%)
1 1818 bp 53.08 6.11 42.90
sw_6_scaffold_30662
Species: Haladaptatus paucihalophilus (100%)
1 1287 bp 61.77 26.34 42.89
sw_6_scaffold_7483
Class: Halobacteria (75%)
4 2498 bp 67.81 7.29 42.87
sw_6_scaffold_9622 4 3535 bp 54.00 8.46 42.86
sw_6_scaffold_13246 1 1246 bp 57.62 9.95 42.86
sw_6_scaffold_15938
Species: Salinibacter ruber (50%)
2 1092 bp 61.90 27.29 42.86
sw_6_scaffold_5421 5 2341 bp 54.63 25.03 42.80
sw_6_scaffold_32254
Species: Halosimplex carlsbadense (100%)
1 1032 bp 70.93 14.44 42.73
sw_6_scaffold_22603 3 1679 bp 48.18 3.93 42.70
sw_6_scaffold_25717
Species: Halococcus saccharolyticus (50%)
2 1238 bp 67.45 19.14 42.65
sw_6_scaffold_5580 2 2295 bp 49.46 6.49 42.61
sw_6_scaffold_16982 2 1042 bp 41.17 5.37 42.61
sw_6_scaffold_5259 3 2394 bp 49.50 7.73 42.61
sw_6_scaffold_15141 1 1135 bp 47.75 7.84 42.56
sw_6_scaffold_25823
Species: Natronomonas pharaonis (100%)
1 1551 bp 62.54 17.47 42.55
sw_6_scaffold_2821 7 4528 bp 51.94 8.87 42.54
sw_6_scaffold_4782
Species: Natrinema sp. J7-2 (50%)
2 2575 bp 56.85 59.22 42.52
sw_6_scaffold_6543 3 2046 bp 44.77 9.82 42.52
sw_6_scaffold_16729 2 1052 bp 64.45 8.17 42.49
sw_6_scaffold_7916
Species: Halococcus salifodinae (66.67%)
3 1795 bp 52.09 11.70 42.45
sw_6_scaffold_5125 2 2439 bp 46.37 9.06 42.44
sw_6_scaffold_6314
Class: Halobacteria (60%)
5 3621 bp 48.63 6.68 42.42
sw_6_scaffold_6114 4 2147 bp 51.56 9.08 42.34
sw_6_scaffold_27366
Species: uncultured archaeon A07HB70 (100%)
1 1311 bp 54.16 5.11 42.33
sw_6_scaffold_10076 1 1510 bp 51.99 7.75 42.32
sw_6_scaffold_13325 3 1241 bp 61.08 36.83 42.30
sw_6_scaffold_8277
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1738 bp 61.10 23.36 42.29
sw_6_scaffold_12864
Species: Isosphaera pallida (50%)
2 1271 bp 52.32 6.77 42.25
sw_6_scaffold_12619 5 2329 bp 52.73 6.10 42.25
sw_6_scaffold_8951
Phylum: Cyanobacteria (66.67%)
3 1641 bp 47.23 11.64 42.23
sw_6_scaffold_15604
Species: Rhodothermus marinus (100%)
1 1109 bp 57.62 27.86 42.20
sw_6_scaffold_9676
Species: Moorea producens (50%)
2 1557 bp 42.71 9.44 42.20
sw_6_scaffold_15846
Species: uncultured archaeon A07HR60 (100%)
1 1096 bp 58.30 6.84 42.15
sw_6_scaffold_9318
Class: Halobacteria (66.67%)
3 1597 bp 63.93 33.06 42.14
sw_6_scaffold_12905 4 1268 bp 55.21 18.77 42.11
sw_6_scaffold_17472
Species: Halostagnicola sp. A56 (50%)
2 1020 bp 56.37 19.61 42.06
sw_6_scaffold_16646
Species: GWA2_Bacteroidetes_32_17_curated (100%)
1 1056 bp 38.45 5.11 42.05
sw_6_scaffold_17796 1 1007 bp 50.84 8.14 42.01
sw_6_scaffold_19196
Species: RBG_16_Actinobacteria_67_15_curated (50%)
2 1316 bp 64.44 10.79 41.95
sw_6_scaffold_11688
Species: Natronomonas pharaonis (50%)
2 1361 bp 64.88 9.33 41.88
sw_6_scaffold_32287 2 1268 bp 56.78 5.13 41.88
sw_6_scaffold_5781
Domain: Metazoa (50%)
4 2243 bp 49.98 8.47 41.86
sw_6_scaffold_10663
Species: Crinalium epipsammum (100%)
1 2397 bp 48.98 11.31 41.80
sw_6_scaffold_17137
Class: Halobacteria (66.67%)
3 1034 bp 63.93 11.51 41.78
sw_6_scaffold_17547
Species: Kocuria marina (50%)
2 1796 bp 65.98 8.52 41.76
sw_6_scaffold_22293 3 1667 bp 56.87 9.72 41.75
sw_6_scaffold_24465
Species: Halobiforma lacisalsi (50%)
2 1453 bp 60.08 9.08 41.71
sw_6_scaffold_17068
Species: Halococcus thailandensis (50%)
2 2043 bp 54.33 8.13 41.70
Displaying items 15251-15300 of 15674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.