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SW_6_UNK

In projects: SW_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.55 Longest contig: 253.36 Kbp Bin length: 44.06 Mbp GC content: 60.59 %
Contigs count: 15674 Features count: 56776 rRNAs count: 17 tRNAs count: 494

Genome completeness

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 15674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_9638
Species: Salinibacter ruber (100%)
2 1560 bp 68.65 71.67 100.96
sw_6_scaffold_10606
Order: Halobacteriales (60%)
5 1456 bp 66.96 11.95 100.96
sw_6_scaffold_20116
Species: Lyngbya sp. PCC 8106 (50%)
2 1468 bp 67.23 8.58 100.95
sw_6_scaffold_10415
Species: CSP1_5_NC10 (50%)
2 1477 bp 60.87 6.03 100.95
sw_6_scaffold_12954
Order: Halobacteriales (66.67%)
3 1266 bp 70.22 17.30 100.95
sw_6_scaffold_13626
Class: Halobacteria (75%)
4 2131 bp 57.39 16.99 100.94
sw_6_scaffold_14406
Species: Salinibacter ruber (50%)
2 1177 bp 63.64 19.12 100.94
sw_6_scaffold_9138
Species: Cystobacter violaceus (50%)
2 1617 bp 69.14 10.45 100.93
sw_6_scaffold_13888
Species: Haladaptatus paucihalophilus (50%)
2 1207 bp 70.01 12.26 100.91
sw_6_scaffold_13738
Species: Halorubrum kocurii (50%)
2 1216 bp 67.27 21.79 100.91
sw_6_scaffold_5369
Domain: Bacteria (66.67%)
3 2355 bp 68.11 10.66 100.89
sw_6_scaffold_15342
Species: Natrinema pellirubrum (50%)
2 1124 bp 68.33 8.72 100.89
sw_6_scaffold_12624
Species: Halococcus saccharolyticus (66.67%)
3 2153 bp 66.93 18.53 100.88
sw_6_scaffold_22288
Order: Halobacteriales (100%)
3 1505 bp 70.96 23.26 100.86
sw_6_scaffold_16946
Species: Natronomonas pharaonis (50%)
2 1044 bp 65.90 23.18 100.86
sw_6_scaffold_12718
Class: Halobacteria (60%)
5 1282 bp 66.38 33.39 100.86
sw_6_scaffold_10938
Species: Halococcus salifodinae (50%)
2 1979 bp 66.09 36.38 100.81
sw_6_scaffold_5742
Genus: Haloferax (50%)
4 2253 bp 65.87 23.52 100.80
sw_6_scaffold_12966
Species: Halosimplex carlsbadense (50%)
4 1265 bp 66.17 20.16 100.79
sw_6_scaffold_17439 3 1021 bp 70.03 15.96 100.78
sw_6_scaffold_17297
Species: Haladaptatus paucihalophilus (50%)
2 1027 bp 67.38 22.69 100.78
sw_6_scaffold_8757 5 1670 bp 66.65 70.18 100.78
sw_6_scaffold_14584
Species: Rhodothermus marinus (50%)
2 1167 bp 69.75 13.62 100.77
sw_6_scaffold_21397
Genus: Halococcus (66.67%)
3 1575 bp 64.57 9.59 100.76
sw_6_scaffold_16571
Species: Salinibacter ruber (50%)
2 1060 bp 63.87 51.70 100.76
sw_6_scaffold_3773
Species: Haloarcula marismortui (50%)
2 3058 bp 51.47 7.91 100.75
sw_6_scaffold_10266
Species: Natronomonas moolapensis (75%)
4 1492 bp 76.27 23.12 100.74
sw_6_scaffold_5969
Class: Halobacteria (66.67%)
3 2186 bp 69.08 10.57 100.73
sw_6_scaffold_10020
Species: Natronomonas moolapensis (50%)
4 1519 bp 67.61 26.79 100.72
sw_6_scaffold_13265
Species: Salinibacter ruber (100%)
2 1245 bp 68.67 7.79 100.72
sw_6_scaffold_4990
Domain: Bacteria (66.67%)
3 2493 bp 62.66 8.95 100.72
sw_6_scaffold_7581
Species: Natronomonas moolapensis (66.67%)
3 2547 bp 67.33 18.37 100.71
sw_6_scaffold_17097
Genus: Haloferax (66.67%)
3 1704 bp 69.66 15.73 100.70
sw_6_scaffold_8440
Species: Halococcus saccharolyticus (50%)
2 1713 bp 68.88 11.91 100.70
sw_6_scaffold_23601
Species: uncultured archaeon A07HR60 (50%)
2 1293 bp 72.93 21.35 100.70
sw_6_scaffold_17692
Species: Halococcus salifodinae (50%)
2 1010 bp 61.88 10.69 100.69
sw_6_scaffold_17629
Species: Natronomonas pharaonis (66.67%)
3 1013 bp 70.98 27.84 100.69
sw_6_scaffold_3966 4 3352 bp 69.96 9.19 100.69
sw_6_scaffold_13766
Species: Natronomonas moolapensis (50%)
6 2512 bp 67.24 60.75 100.68
sw_6_scaffold_35872
Species: Halobacterium sp. DL1 (66.67%)
3 1037 bp 70.88 13.11 100.68
sw_6_scaffold_16959
Species: Natronomonas moolapensis (100%)
2 1043 bp 67.79 35.19 100.67
sw_6_scaffold_11625 2 1365 bp 52.23 8.86 100.66
sw_6_scaffold_6193 3 2128 bp 58.65 25.85 100.66
sw_6_scaffold_13735
Species: Halorubrum distributum (50%)
2 1216 bp 64.06 14.97 100.66
sw_6_scaffold_27493
Species: Bacillus hemicellulosilyticus (50%)
2 1216 bp 69.57 7.73 100.66
sw_6_scaffold_16423
Species: Halobacterium sp. DL1 (100%)
2 1067 bp 70.10 10.78 100.66
sw_6_scaffold_11522 3 1374 bp 54.00 6.77 100.66
sw_6_scaffold_10664
Species: uncultured archaeon A07HB70 (66.67%)
3 1985 bp 69.37 34.76 100.66
sw_6_scaffold_7324
Species: Halococcus saccharolyticus (50%)
2 1890 bp 69.58 10.53 100.64
sw_6_scaffold_15804
Species: Natrinema versiforme (50%)
2 2048 bp 71.09 12.79 100.64
Displaying items 201-250 of 15674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.