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sw_6_scaffold_1581_8

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: comp(5424..5903)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0I0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 164.0
  • Bit_score: 270
  • Evalue 1.40e-69
RNA-binding protein {ECO:0000313|EMBL:ELZ27649.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1. similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 164.0
  • Bit_score: 270
  • Evalue 1.90e-69
PUA domain containing protein similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 159.0
  • Bit_score: 264
  • Evalue 1.60e-68

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 480
ATGAACGTCAAGTCGCGCCACCACCTCCGGGCCGACGACATCGCCGCCATCGAGGACGCCATCGCGGCCAGCCTCGGCGTCGAACTCGACGCCGACAGCTACGAGCGCGTCGCGTTCGACGACAGCGACTGGGAGGTCGTCCTCGTGGACGGCGACCCGCTCGTGCTCTACGTGGACGAGGAACCGTTCCTGACGGTCCAGGGGGCAAACGCCTACCCACCCGAGCGCGGCGTCGTCACCGTCGACGCCGGCGCGGTCTCGTTCGTCTCGGACGGCGCGGACGTGATGCGCCCGGGCATCGTCGAGGCCGACCCCGACATCGAGGCCGGAGACCTGGTCGCCGTCAACGAGGAGAGCCACGGGAAGTTCCTCGCAGTCGGGCGCGCGCGGATCGACGGCGACGATATGGTCGGCGACTCCGGCAAGGTCGTCGACTCTATCCACCACGTCGGCGACGACCTGTTCGAGTTTTCCGTCTGA
PROTEIN sequence
Length: 160
MNVKSRHHLRADDIAAIEDAIAASLGVELDADSYERVAFDDSDWEVVLVDGDPLVLYVDEEPFLTVQGANAYPPERGVVTVDAGAVSFVSDGADVMRPGIVEADPDIEAGDLVAVNEESHGKFLAVGRARIDGDDMVGDSGKVVDSIHHVGDDLFEFSV*