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sw_6_scaffold_2129_3

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: comp(1552..3081)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecD n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM19_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 506.0
  • Bit_score: 645
  • Evalue 3.80e-182
secD; preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 506.0
  • Bit_score: 645
  • Evalue 1.10e-182
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 506.0
  • Bit_score: 645
  • Evalue 5.40e-182

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Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1530
ATGAGCGCGCTCCGGGACAACTGGCGGGGCGCGCTCCTGGTCGTGTTCGTCCTCGCCAGCGCCGTCGCGCTGTTCGTCTCCGGTGCGCCGCCGGGGGCGCCCGAGTCCGACGGGTCGCTCACGAACCTCCAGTACGGCATCCAGCTCAGCGGCGGGACCAGCCTCCAGGCGCCGCCGGTCGGCACCACCGCCGAGGGCGCCAACGTCTCTGTCGACGAGGAGACGGCGCTCGTCCGGAACATCTCCCGGCGACTGTCGGTCGAACCGCTCGACGTCCGGGTCTCCGCACGGTCGGACACCGTCGAGGTGTTCGTCAAGAACGTCAGCCGGGCGCAACTCCGGGCGGCGCTGGAAGCCGAAGGGTACACCCCCGAGACCGTCCGGGACGGCGTGACCAGGGAGACGCGCCAGGAACTCGTGAGAGTCATCGACGACAAGATCCGGCGGTCCGCGCTGGGCAGCGGCAGCGTCTCGACGATCCGGTCGCCCGACGGGACGAACTTCGTCTCGGTGACGGCCCCCGACAGGGACCGCGAGGAACTCCGCTCGCTCATCGACGAACGCGGCGTCGTCCAGGTGTTCGCGTTCTATCCCACCGAGAACGGTACCTACGTCCGCGAGCAGGTCCTCGAACAGGACGACTTCCAGGACATCGGCAACGCCGAGCGGACCAACAGCGGGCCGTCGGTGTCGGTCACGATCCGGGACTCGGTCGCCGAGGACTTCCAGGAGGAGATGGTCCAGTACGGCTTCGACCAGCCACGGACCTGCCGGTACAACCGCGACAGCCCGCAAAACTCCACCGGCCGGTGCCTGATCGCGACGCTGAACGGCGACGTCGTCTTCGCCGGCGGCGTCCGGGCGGGACTCGCCGAACTGTACGCGTCCGGCGAGTTCGCCAAGGACCCGACGTTCCAGATGACCACCCGGAACATGTCCGAGGCCCGCGAACTCGAGATCAGCCTCCAGGCCGGTCGGCTCCCGGCCCCGCTGAACTTCGAGGAGGCCCGGAGCACCACCCGCGAACCCGCCCTGGCCGAGCGGTTCAAGACCAACTCCCTGGTGACCGGGATCCTCGCCGTACTGGCGGTCAGCATGGCCGTCTACCTCCGGTACGAGAACGCCCGCGTCGCGCTCCCGATGATCGTCACCGCGCTCTCGGAGGTGTTCATCCTGCTGGGGTTCGTGGCGTTCGTCCAGTACCCGCTGAACCTCTCGCATCTCGCCGGCTTCATCGCCGTCATCGGGACGGGGGTCGACGACCTGATCATCATCGCCGACGAGATCCTCCAGCAGGGTGAGATCGCGACCGGGCGCGTCTTCCAGAACCGCTTCCGGAAAGCCTTCTGGGTGATCGGCGCCGCCGCGGCGACGACCATCCTGGCGATGAGTCCGCTCACGGTGCTGGGACTGGGCGACCTCAGCGGCTTCGCCATCATCACTATCGTGGGCGTCCTCATCGGGGTCATCGTCACCCGCCCCGCCTACGGCGACATCCTCCGGAACCTGATCCTCCGCCAGCAGGAGTGA
PROTEIN sequence
Length: 510
MSALRDNWRGALLVVFVLASAVALFVSGAPPGAPESDGSLTNLQYGIQLSGGTSLQAPPVGTTAEGANVSVDEETALVRNISRRLSVEPLDVRVSARSDTVEVFVKNVSRAQLRAALEAEGYTPETVRDGVTRETRQELVRVIDDKIRRSALGSGSVSTIRSPDGTNFVSVTAPDRDREELRSLIDERGVVQVFAFYPTENGTYVREQVLEQDDFQDIGNAERTNSGPSVSVTIRDSVAEDFQEEMVQYGFDQPRTCRYNRDSPQNSTGRCLIATLNGDVVFAGGVRAGLAELYASGEFAKDPTFQMTTRNMSEARELEISLQAGRLPAPLNFEEARSTTREPALAERFKTNSLVTGILAVLAVSMAVYLRYENARVALPMIVTALSEVFILLGFVAFVQYPLNLSHLAGFIAVIGTGVDDLIIIADEILQQGEIATGRVFQNRFRKAFWVIGAAAATTILAMSPLTVLGLGDLSGFAIITIVGVLIGVIVTRPAYGDILRNLILRQQE*