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sw_6_scaffold_245_10

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: 5564..6532

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSR0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 312.0
  • Bit_score: 596
  • Evalue 1.30e-167
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 312.0
  • Bit_score: 596
  • Evalue 1.80e-167
tfbA; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 322.0
  • Bit_score: 564
  • Evalue 2.60e-158

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 969
ATGGAACGGCCGAGCCGTCAACGCGAGCGCGCGGAGTCCGACGAAAAACAGCAGGAATCGGAGGGTGAGCAGGCCGAACAGCAGTGTCCCGAATGCGAATCGTCGGCGCTGGTGACCAGCGCGGACGGGGGCGAGATCGTCTGTGAGGACTGCGGACTCATCATCGACGAAGGGAACATCGACCGCGGTCCGGAGTGGCGGGCGTTCAACCACAGCGAACGCCAGGAGAAATCCAGGGTCGGCGCGCCGACGACCCAGACGATGCACGACAAGGGGTTGACCACCCAGATCGACTGGAAGGACAAGGACGCCTACGGGCGTAGTCTCTCCTCGGAGAAGCGCAGCCAGATGCACCGACTGCGCAAGTGGCAGGAACGGATCCGAACCAAGGACGCCGGCGAGCGCAACCTCCAGTTCGCGCTCTCGGAGATCGACCGCATGGCTTCGGCGCTCGGGGTGCCACGCTCGGTCAGGGAGGTCGCCTCGGTCATCTACCGGCGGGCGCTCGACGAGGACCTCATCCGGGGGCGCTCGATCGAGGGCGTCGCCACCGCCTGCCTGTACGCCGCCTGCCGCCAGGAGGACATCCCCCGCTCGCTGGAGGAGGTCTCGGAGGTCTCCCGCGTCGAACAGAAGGAGATCGGGCGCACTTATCGCTACGTCGCACAGGAGCTGAGCCTGAAGATGGAGCCGGTCGACCCCAAGCAGTACGTCCCCCGGTTCGTCTCGGAGCTCGGCCTCAGCGAGGAGGTCCAGGCCAAGGCCAACGAGATCATCGACGTGACCGCCGAGAAGGGGCTGCTCTCGGGCAAGTCGCCGACGGGCTACGCCGCGGCCGCCATCTACGCCGCGTCCCTGCTCTGTAACGAGAAAAAGACCCAGCGCGAGGTCGCCGACGTCGCCCAGGTGACCGAGGTCACCATCCGGAACCGCTACCAGGAACAGATCGAAGCGATGGGCATCCACTGA
PROTEIN sequence
Length: 323
MERPSRQRERAESDEKQQESEGEQAEQQCPECESSALVTSADGGEIVCEDCGLIIDEGNIDRGPEWRAFNHSERQEKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSLSSEKRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALDEDLIRGRSIEGVATACLYAACRQEDIPRSLEEVSEVSRVEQKEIGRTYRYVAQELSLKMEPVDPKQYVPRFVSELGLSEEVQAKANEIIDVTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIH*