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sw_6_scaffold_367_4

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: comp(2213..2665)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPK1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 159.0
  • Bit_score: 260
  • Evalue 1.30e-66
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 159.0
  • Bit_score: 260
  • Evalue 1.90e-66
transcription factor TFIIE subunit alpha similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 172.0
  • Bit_score: 255
  • Evalue 1.20e-65

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 453
ATGGCTTTTGAGGACCTCCTGGAGAACCCCGTGATACAGAAGTACCTCCACGAGCTCGTGGGACCGAAAGGGATGCCGGTGGCGGCGGCACCGCCGGACGGAGAGGTGACAGACGAGGAACTCGCCGAGGAGCTTGGGCTGGAACTCAACGACGTCAGGCGTGCGCTTTTCATCCTCTACGAGAACGACCTGGCGAGCTACCGGCGGCTCCGCGACGAGGACTCGGGGTGGCTCACCTACCTGTGGACCTTCGAGTACGAGAAGATCCCCGAACAGCTCGAATCCGAGATGCACCGGCTGCTCGACGCGCTCGAGGAGCGCAACGAGTACGAGCACGACCACGAGTTCTACCTGTGTGAGACCTGTGGCATCCGCTTCGAGTTCGGCGAGGCGATGGACGAGCGCATCGAGGCCTTGCGCGACGAACTGAACGTCGACCGCACCGAAGCCTGA
PROTEIN sequence
Length: 151
MAFEDLLENPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILYENDLASYRRLRDEDSGWLTYLWTFEYEKIPEQLESEMHRLLDALEERNEYEHDHEFYLCETCGIRFEFGEAMDERIEALRDELNVDRTEA*