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sw_6_scaffold_54_6

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: 3570..3905

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 111.0
  • Bit_score: 183
  • Evalue 4.30e-44
3-isopropylmalate dehydratase small subunit n=2 Tax=Halorubrum RepID=M0EKZ8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 111.0
  • Bit_score: 194
  • Evalue 5.10e-47
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:ELZ47079.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 111.0
  • Bit_score: 194
  • Evalue 7.20e-47

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Taxonomy

Halorubrum coriense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 336
ATGATGCGCTGGGGCGTCGACGGCGTCGTCGGCGAATCGTTCGCCGAGATCTTCCGCGACAACTGCAAGTCACTGGGGATCCCCGCGGTCACCGCCGACCACGAGACCGTCACCGACCTCCAGGAGTGGATCGAAGCCAACCCCGACGGCGACATCGAGGTCGACGTCGAAACCGGGACCGTCACCTACGCCGACACCGCCATCGACGTCGGGATCACCGACGCGATGCAGGAAGCCCTCGTCGAGGGCATCTGGGACACGACCGCGCTGATGTACTCCAACGTGAGCAAGGTCGAGGAGACGGTCGCGGACCTGCCCTACGTCGGGAGCGACTGA
PROTEIN sequence
Length: 112
MMRWGVDGVVGESFAEIFRDNCKSLGIPAVTADHETVTDLQEWIEANPDGDIEVDVETGTVTYADTAIDVGITDAMQEALVEGIWDTTALMYSNVSKVEETVADLPYVGSD*