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sw_6_scaffold_638_14

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: comp(9232..9558)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 108.0
  • Bit_score: 188
  • Evalue 3.80e-45
DNA-directed RNA polymerase subunit n=3 Tax=Haloarcula RepID=Q5V5C5_HALMA similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 108.0
  • Bit_score: 188
  • Evalue 2.70e-45
rpoM; DNA-directed RNA-polymerase subunit M similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 108.0
  • Bit_score: 188
  • Evalue 7.70e-46

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Taxonomy

Haloarcula marismortui → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 327
ATGGAGTTTTGCGACGACTGCGGTTCGATGATGAAGACCGAAGGGGACCACTGGGTCTGTGGCAGTTGCGGCGCACAGAAGGGCCGCAACGAGGAGAAAGAGCAGGCCCAGGCGGTGACGACCCAGGGACAGGAGGAGACGGAGATCGTCGACACCTCCGAGGTCGACGCCGCGGAGACGACGCCGACGACCAGCGCCGAGTGCCCCGAGTGTGGCAACGACCGGGCACACTACGAGATGAAACAGATCCGGGCGGCCGACGAGAGCGAGACGCGGTTTTTCACCTGCACCGAGTGCGGCCAGAAGTGGCGCGAAGACGACCACTGA
PROTEIN sequence
Length: 109
MEFCDDCGSMMKTEGDHWVCGSCGAQKGRNEEKEQAQAVTTQGQEETEIVDTSEVDAAETTPTTSAECPECGNDRAHYEMKQIRAADESETRFFTCTECGQKWREDDH*