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sw_6_scaffold_715_17

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: 12118..12639

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 172.0
  • Bit_score: 293
  • Evalue 1.30e-76
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 172.0
  • Bit_score: 293
  • Evalue 1.80e-76
rps4p; 30S ribosomal protein S4P similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 174.0
  • Bit_score: 256
  • Evalue 4.80e-66

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 522
ATGGCGCTCGGGAGCAACACCAAGTTCTACGAGACGCCCAACCACCCCTACCAGGGCGAACGCATCAGCGAGGAGGCCGGCCTCATCGGCCAGTACGGCCTCAAGAACAAGGAGGAACTCTGGCGGGCCCGCTCGGAACTGCGGGCCTACCGCCGCGAGGCGCGGAAACTGCTCGGCCAGGTCGACAGCGAGGAGGCCGACCGCGAGACCGAGGAGTTCCTCGCGCGCCTCAAGCGTATCGGCGTACTCGGCGAGAACGACTCGCTCGACGACATCCTGTCGCTGGACGTGACGGACATCCTCGAACGGCGCCTGCAGACCGTGGTCTACCGGAAGGGGCTGGCCAACACGACCAGCCAGGCGCGGCAGTTCGTCGCTCACGGCCACATCACCGTCGACGGCCGGCGGGTGACACGCTCGTCGAGGAAGGTGGCCGCCGCCGAGGAGGACGCCGTCGCGTTCGACTCGGCCAGCCCGCTGACAGACGAACTCCATCCCGAACGCGCGGAGGACAACCAATGA
PROTEIN sequence
Length: 174
MALGSNTKFYETPNHPYQGERISEEAGLIGQYGLKNKEELWRARSELRAYRREARKLLGQVDSEEADRETEEFLARLKRIGVLGENDSLDDILSLDVTDILERRLQTVVYRKGLANTTSQARQFVAHGHITVDGRRVTRSSRKVAAAEEDAVAFDSASPLTDELHPERAEDNQ*