ggKbase home page

sw_6_scaffold_806_15

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: 12704..14341

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=797114 species="Archaea; Euryar similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 565.0
  • Bit_score: 774
  • Evalue 1.10e-220
DNA-directed DNA polymerase (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 566.0
  • Bit_score: 702
  • Evalue 1.00e-199
DNA polymerase II small subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3B5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 565.0
  • Bit_score: 775
  • Evalue 2.60e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1638
GTGCCCCTGGAGACGCCGGTCCACGTCGCGAACGCGCTCGCCCGCCAGGGCTACAACGCCGACCCCGACGCCGTGACGCTCATCGCCGCCGCCGAGGACCCTGCCGCCGCGCTCGAACGCACACTCGAAACAGTCCCCGACGACGCGGTGAAGCTCACCGCCGACCACGTCAGCGGCGCACTCGACCGCTCGCGGTCTCTCGATTCGACTGCCCCGAAAGCCGACCCTACTCCCGACGGGACGCCCGCCGGCCCGGACCCGAGCAACCCCACTGTTTCAACTGGAGATACGTCCCCGAAATCGACAGATGCGGACGGCGCGTCTCCAGTCGAAACGGAGGGGGTCGGCCGGGACGGCGAGCGGGACGGTCGCGGACAGTCCGTGGCCGGTTCGAGCGGCGAGCGGGGTGGTCCCGGTGAGTCGACGGCCTCAAGTACCGCGTCCGGTACCGTCGACGCGTCGTCGACTCTCGGACGGGACGCCGGCGACTCGTCGGCCAGGTCGGTCGAGGTCGACGGCGACTTCGCGAGCACGGGGACCGGCGAGTACGAGGACTTCGTGGCGGTGTTCCGGGACCGCTACGAGACGCTCTCGGGGACGCTCAGGTCGCGGGTCAACCACCGGCCGGCCGACGCGCTGGAGTCGACGCCGGGCAACAACGACGCGGCCCTCGTGGGGATGGTCTCGGACATCCGCTCGACGGCGAGCGGCCACTGGCTGGTCGAACTCGAGGACACCACCGGCACGTTCCCCTGTCTCGTGATGAAAGACCGGGAGTTCGCGGACCTGGTCGACGAACTCCTCCTCGACGAGGTGGTCGCCGTCGAGGGCTCTCTCGCCGACGACGGCGGCATCCTCTTCGTCGACGCGATGCACTTCCCGGACGTCCCGCGGACCCACGACCCCTCGACCGCCGACCGGGAGGTCGAGGCGGCGCTGATAAGCGATGTCCACGTCGGCAGCCAGGAGTTCGCGGCCGACGCCTGGCACCGGTTTGCCGACTGGCTCCACACCGGCGTCTACCCCGACCAGGACGAGGAACTGGATATCGTCGACATCTACGAACAGTACGAGGCTTTCAGCGAGCACCTGAAGGCCGTCCCCGGCGACATGGAGACCGTCATGATCCCGGGCAACCACGACGCCGTCCGCCTGGCCGAACCCCAGCCCGCCTTTGACGAGGAACTCCGGTCGATCATGAGCGCCCACGACGCCCGTATCTCCGCCAACCCCTCGACGGTGACCGTCGAGGGCGTCGACATCCTCATGTACCACGGCGTCTCGCTGGACGAGGTCATCGCCGAGTTGCCCGACGAGAAGGCCAGCTACGACGACCCGCACCTGGCGATGTACCAGCTCCTCAAGAAACGCCACGTCGCGCCGCAGTTCGGCGGCAAGACCCGACTCGCTCCCGAGGAGGAAGACCACCTCGTCATCGAGGAGGTCCCCGACGTCTTCCACGCCGGCCACGTCCACAAACTCGGCTGGGGGAAGTACCACAACGTCCTCACCATCAACTCGGGGTGCTGGCAGGAACAGACCGCGTTCCAGGCCAGCGTCAATATCGACCCCGACTACGGCTACGCCCCCGTCGTCTCGCTCGACACGCTCGACCTCACTGTCCGGGATTTCACCTGA
PROTEIN sequence
Length: 546
VPLETPVHVANALARQGYNADPDAVTLIAAAEDPAAALERTLETVPDDAVKLTADHVSGALDRSRSLDSTAPKADPTPDGTPAGPDPSNPTVSTGDTSPKSTDADGASPVETEGVGRDGERDGRGQSVAGSSGERGGPGESTASSTASGTVDASSTLGRDAGDSSARSVEVDGDFASTGTGEYEDFVAVFRDRYETLSGTLRSRVNHRPADALESTPGNNDAALVGMVSDIRSTASGHWLVELEDTTGTFPCLVMKDREFADLVDELLLDEVVAVEGSLADDGGILFVDAMHFPDVPRTHDPSTADREVEAALISDVHVGSQEFAADAWHRFADWLHTGVYPDQDEELDIVDIYEQYEAFSEHLKAVPGDMETVMIPGNHDAVRLAEPQPAFDEELRSIMSAHDARISANPSTVTVEGVDILMYHGVSLDEVIAELPDEKASYDDPHLAMYQLLKKRHVAPQFGGKTRLAPEEEDHLVIEEVPDVFHAGHVHKLGWGKYHNVLTINSGCWQEQTAFQASVNIDPDYGYAPVVSLDTLDLTVRDFT*