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sw_6_scaffold_6210_3

Organism: SW_6_Actinobacteria_72_12

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 7 / 38
Location: comp(1099..3117)

Top 3 Functional Annotations

Value Algorithm Source
Selenocysteine-specific elongation factor n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W8Y4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 583.0
  • Bit_score: 364
  • Evalue 1.70e-97
selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 454.0
  • Bit_score: 398
  • Evalue 2.00e-107
translation elongation factor similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 562.0
  • Bit_score: 358
  • Evalue 4.60e-96

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2019
ATGCACGTCGTCACCACCGCTGGCCACGTCGACCACGGCAAGAGCGCGCTGGTGCGCGCCCTGACCGGCATCGAGCCTGACCGCTTCGCCGAGGAGCGCCAACGGGGTCTGACCATCGACTTGGGCTTCGCCTGGTGCGAGCTGCCCTCCGGCGCGCGGGCGGCGTTCGTCGACGTGCCCGGCCACGAGAGGTTCATCGCCAACATGCTGGCCGGGGTGGGCTCGGTGGAGCTGGCCCTGCTGGTGGTGGCCGCCGACGAGGGCTGGATGCCCCAAAGCCGCGAGCACCGCGACATCCTGGACGTGCTGGGGGTGCGCCACGCGGTCGTGGCGGTCACCAAGACCGACCTGGTCGACGCCGAGACCGCCGAGCTCGCCGTCGAGCTGGTCCGTGACGAGCTGGCCGGTACCGCCCTGGCCGACGCCGAGATCGTGGCGGTCAGCGGCTCCTCAGGCGCGGGCGTGGGCCAGCTGCGGCAGTCGTTGGACCGCATGATCGGCGACACCGGCGAGCCCGCCGACCGTGGCCGCCCCCGCCTGTGGGTCGACCGCGCCTTCACCATTCGCGGTGCCGGCACCGTCGTGACCGGCACGTTGGCCGGTGGCGCGCTGCACACCGGCGACGAGGTGGGCCTGCGCCCGGGCCGCAGCCTCGGGCGCGTGCGGGGACTGCAGATGCTGGGGGAAGCCACCGCCGTCGCCCCGCCGGGGGCGCGGGTGGCGGCCAACCTCGCCGGGGTCGACCTCGACGAGGTCCACCGGGGCCAGGCGCTGGTGCGCCCGGCCCAGTGGGCGGTCACCGACCGGGTCGACACGCGCCTGCGCGTGACCGGCGGCGCCGAGGTCAGCCATCGTGGGGCGTGGCGGGTCCACGTGGGGACCGCCGAGCGCGACGCCGTGGTGCTGCCCACCGCCGCCGCCCCGATCACCGACGATGGGTTCGCGCGCCTCGAGCTCGACGAGCCCGTGCCCATCACCGCCGGCGACCGGCTGGTGGTGCGCGAGACGGGGCGGTGGGTGACGGTCGCCGGCGGCGTGGTGCTCGACCCCGAGCCGGCCGGCGCCCCGCGGGGGCGCGCCGCGCGCTCGCGGCGGAGCGCCGAGCTGTCCGCCCGGGCGGCGGCGCTGGCCGACGACGACCGGGTGACCCTGCTGGGTGCCCACCTGGCCGAGCGGGGCGCCGACGAGCGCGAGCGGGCGCTGCGCGCGTGCGGCATGGATGCCCCCGAGGCGAACGCAGCGGTGGCCTCCGGCGTGGTGCAGCGCGCCGGCCGGCTTGTGGACCCCGCGGCGCTGGCGCGCTGGCGCGACGCGGCGACGACGGCGTTGGCCCGGGCCCACGCCGAGCAGCCCCACGCCCCGGCGGCGCCACGCGACGTCGTCGAGCGCGCCCTGGCAGAGGCGGGCTGTGGCGAGAGCAACGTGGAGGCGGTGATGGCCCAGCTGGTCGAAGAGGGCGCGGTTGTGGTCGCCTCGCATCGACGGCGAGTTCGTCGCCCAGACGGAGGTGCCACGATGGGTCGGATTCGACAGCGACAGCCTGGAGACCACCGGCGTGCTGGTGCGCCTGGCCGAGGACCTGGCGGTGCCGGCGGCCACCGTCGACGACGCCGCCAAGCGCCTGCGCGCGCTGTACGAGCAGCACGGGGCGTTTACCGCCGCTCAGGCCAAGGAAACTTTGGGCACCACCCGCCGCCTGGCGGTGCCGCTGCTGGAGCATCTGGACAAACAGGGCGTCACCCGCCGTCAGGGCGACCTGCGCGTGATCACCGCCTAGCGAGGCCGGGGGCAAGCAAACCACGCCACAGCCCACCGACTTGCTCAGGCCACCTCGGCGACCGCCTCGACCTCCACCGGCGATCCCTTGGGCAGCGCCGCCACCCCGACGGCCGCTCGGGCGTGCTGGCCGGCCTCGCCGAGCACGTCGCCCACCAGCTCGCTGGCGCCGTTGGCCACGAGGTGGTGAGCGCTGACCGGTCTCCAGGGCCACGTCGTGGCCAAGCCGGCCGACCGCGATGA
PROTEIN sequence
Length: 673
MHVVTTAGHVDHGKSALVRALTGIEPDRFAEERQRGLTIDLGFAWCELPSGARAAFVDVPGHERFIANMLAGVGSVELALLVVAADEGWMPQSREHRDILDVLGVRHAVVAVTKTDLVDAETAELAVELVRDELAGTALADAEIVAVSGSSGAGVGQLRQSLDRMIGDTGEPADRGRPRLWVDRAFTIRGAGTVVTGTLAGGALHTGDEVGLRPGRSLGRVRGLQMLGEATAVAPPGARVAANLAGVDLDEVHRGQALVRPAQWAVTDRVDTRLRVTGGAEVSHRGAWRVHVGTAERDAVVLPTAAAPITDDGFARLELDEPVPITAGDRLVVRETGRWVTVAGGVVLDPEPAGAPRGRAARSRRSAELSARAAALADDDRVTLLGAHLAERGADERERALRACGMDAPEANAAVASGVVQRAGRLVDPAALARWRDAATTALARAHAEQPHAPAAPRDVVERALAEAGCGESNVEAVMAQLVEEGAVVVASHRRRVRRPDGGATMGRIRQRQPGDHRRAGAPGRGPGGAGGHRRRRRQAPARAVRAARGVYRRSGQGNFGHHPPPGGAAAGASGQTGRHPPSGRPARDHRLARPGASKPRHSPPTCSGHLGDRLDLHRRSLGQRRHPDGRSGVLAGLAEHVAHQLAGAVGHEVVSADRSPGPRRGQAGRPR*