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SW_6_Actinobacteria_72_12

In projects: SW_6

Consensus taxonomy: Actinobacteria → Actinobacteria → Bacteria

Taxonomy override: Actinobacteria

Metagenomic Context

Parent: SW_6_UNK

Properties

Avg. coverage: 11.71 Longest contig: 10.60 Kbp Bin length: 724.69 Kbp GC content: 71.73 %

Contigs count: 315 Features count: 907 rRNAs count: 0 tRNAs count: 6

Genome completeness

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 7 / 38

Displaying items 301-315 of 315 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_6_scaffold_14070 Species: Kitasatospora setae (50%)	2	1195 bp	73.64	9.62	66.78
sw_6_scaffold_13109 Class: Actinobacteria (66.67%)	3	1257 bp	69.37	12.50	66.59
sw_6_scaffold_6192 Phylum: Actinobacteria (50%)	4	3874 bp	70.70	10.40	65.98
sw_6_scaffold_26637 Class: Actinobacteria (50%)	4	1999 bp	68.33	11.26	65.88
sw_6_scaffold_30079 Species: Catenulispora acidiphila (100%)	1	1115 bp	72.02	7.98	65.38
sw_6_scaffold_9193 Phylum: Actinobacteria (50%)	4	3900 bp	69.46	12.15	63.85
sw_6_scaffold_9504 Class: Actinobacteria (50%)	4	2905 bp	71.36	13.25	63.82
sw_6_scaffold_7929 Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (50%)	2	1793 bp	69.55	11.60	63.25
sw_6_scaffold_17932 Phylum: Actinobacteria (50%)	4	2221 bp	70.55	11.30	62.00
sw_6_scaffold_12638 Species: Frankia sp. EAN1pec (50%)	2	2010 bp	72.99	12.54	60.15
sw_6_scaffold_23113 Species: Thermomonospora curvata (50%)	2	1255 bp	72.59	12.43	60.00
sw_6_scaffold_30115 Species: RBG_16_Actinobacteria_68_21_curated (50%)	2	1155 bp	71.95	13.42	60.00
sw_6_scaffold_22138 Species: Streptomyces cattleya (50%)	2	2254 bp	70.45	12.02	52.44
sw_6_scaffold_12539 Species: Candidatus Microthrix parvicella (50%)	2	1295 bp	71.12	12.90	52.36
sw_6_scaffold_32271 Species: Knoellia sinensis (50%)	2	1036 bp	76.83	13.42	44.31

Displaying items 301-315 of 315 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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