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SW_6_Actinobacteria_72_12

In projects: SW_6

Consensus taxonomy: Actinobacteria → Actinobacteria → Bacteria

Taxonomy override: Actinobacteria

Metagenomic Context

Parent: SW_6_UNK

Properties

Avg. coverage: 11.71 Longest contig: 10.60 Kbp Bin length: 724.69 Kbp GC content: 71.73 %

Contigs count: 315 Features count: 907 rRNAs count: 0 tRNAs count: 6

Genome completeness

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 7 / 38

Displaying items 301-315 of 315 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_6_scaffold_18233 Class: Actinobacteria (66.67%)	3	1488 bp	71.44	9.48	93.55
sw_6_scaffold_12611 Species: Frankia symbiont of Datisca glomerata (100%)	1	1290 bp	71.63	9.46	99.77
sw_6_scaffold_12502 Species: Microbispora sp. ATCC PTA-5024 (50%)	2	1298 bp	73.81	9.24	97.77
sw_6_scaffold_6517 Species: Cellulomonas carbonis (50%)	2	2052 bp	70.13	9.06	96.64
sw_6_scaffold_18610 Species: Patulibacter medicamentivorans (50%)	2	1500 bp	71.20	8.93	91.40
sw_6_scaffold_32331 Species: Streptomyces sp. WT3 (50%)	2	1065 bp	68.83	8.92	95.21
sw_6_scaffold_28929 Species: Streptomyces sp. Mg1 (50%)	2	1128 bp	70.30	8.87	81.91
sw_6_scaffold_16159 Species: Frankia sp. CpI1-S (100%)	1	1082 bp	74.86	8.87	99.82
sw_6_scaffold_10389 Species: Thermomonospora curvata (100%)	1	1481 bp	69.89	8.85	86.09
sw_6_scaffold_8652 Species: Ilumatobacter coccineus (50%)	2	1686 bp	72.60	8.72	100.18
sw_6_scaffold_4377 Class: Actinobacteria (57.14%)	7	4545 bp	61.58	8.67	91.49
sw_6_scaffold_16014 Species: Streptomycetaceae bacterium MP113-05 (100%)	1	1089 bp	70.89	8.63	69.42
sw_6_scaffold_16688 Species: Actinotalea ferrariae (50%)	2	1054 bp	70.97	8.35	99.91
sw_6_scaffold_30079 Species: Catenulispora acidiphila (100%)	1	1115 bp	72.02	7.98	65.38
sw_6_scaffold_9879 Species: Actinoplanes friuliensis (50%)	2	1535 bp	69.45	7.82	82.67

Displaying items 301-315 of 315 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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