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sw_6_scaffold_2233_3

Organism: SW_6_Oscillatoriophycideae_48_11

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 1728..4550

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=13035 species="Bacteria; Cya similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 941.0
  • Bit_score: 1402
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YSA2_DACSA similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 941.0
  • Bit_score: 1402
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 941.0
  • Bit_score: 1402
  • Evalue 0.0

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Taxonomy

Dactylococcopsis salina → Dactylococcopsis → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 2823
ATGGCGTTTTCTTCGGTTATTCGCGCCCTAGAGCGCTCGCCGCTTACAGGGGAACTTCGCACCACACTTAATCAGCAACAATCGCTGCATTTAAATGGGATTCCTCGCCTACCTAAAGGTTTAGTTGCCTCGGCGTTCGCCCAAGGTTCCCAGCAGAACTTGTTTGTTGTCTGTGCCACTCTCGAAGAGGCAGGGCGCTGGGCGGCACAACTCCAGACAATGGATTGGCAGACAGTCCATTTTTACCCCACCTCCGAGGCATCCCCGTATGAACCGTTTGATCCCGAATCAGAGATGAGTTGGGGACAAATGCAAGTGCTGGCAGATTTAGCGATTGCCCACCCAGAGGGAGTTGCGATTGTGGCAACCGAGCGATCGCTCCAACCTCATCTGCCGCCTCCGGCTGCGTTTCAGTCCTACTGCCTTACCCTGGAAACTGGGATAGCACGGGATTCCAAAACGCTGGATCGACAGTTAACGCAACTTGGATATGAGCGGGTTTCTCTAGTCGAAACGGAAGGGCAATGGAGTCGGCGCGGTGACATCGTGGATGTCTTCCCCGTAGCAGCAGAGTTACCCGTGCGGCTAGAATGGTTTGGCGATGAGTTAGAACAACTCCGGGAATTCGATCCTGTCTCTCAGCGCTCTCTCGATCAGGTGAAACAGTTGGCGTTGACACCGACTAGTTTTGCTCCGATTATTGTTGATGCTTTGAGGGGGAAAGGCGGACAAGGGGAGAAGGAGACGGGGGGACAAGGGGCAATTAATGCTCTGAAAGCTCATCTATCACAAGAGGAACAGGAAGCTCTAGAAGAGGGCAAACTCCCTGAGGGAATGCATCGCTTTTTGGGACTCGCCTTTGACAAACCTGCCTCCCTACTAGATTACCTCCCAGAAAGCACTCTATGCGCCATTGATGAGGTAGAACAGTGTCGTGCCCATAGCGCACGCTGGCTCGAACATACCGAGGAACAGTGGCAAGAACAAGGTAGGGGCGATCCGTCGGTTCGCCCTAACTCGTTACCAAAAATTCATCGCTCTTTTGATGAATCTCTGGTAGCAGCAGCGGCTTTTCAACAACTGTATCTCTCGGAGTTAGCAGAAGAAAATTCTGATGCTGTGAACCTCTCTAGTCGCCCCATTCCCGCTACTCCGCACCAGTTTGGGAAATTAGCTGGGATGCTGCGCGGCGAGCAAGAGGTTTACCACGGCATTAGCCTGAAAAATTTCTCCACCTGGCTGATTTCTGCCCAACCTTCTCGTTCGGTGGCACTGCTGCAAGAACACGATTGTTCAGCTCAGTTTGTCCCCAACTCCCGCGACTATCGGGCGATTGAGCGGCTTCACACCCAGCATATCCCCACTGCGGTGAAATATTCCGGTTTGGCGGAATTGGAAGGGTTTATTCTGCCCACGTTTCGGATTGTTGTAGTTACAGATCGAGAGTTTTTTGGGCAGCACGTTCTAGCAACACCGGGATACATTCGCAAGCGCCGTCGTGCTACCTCCAAACAAGTCGATTTAAATAAGCTGCGCCCTGGGGATTATGTGGTTCATAAAAACCACGGTGTGGGCAAGTTTCTGAAGCTAGAAAGCTGGGAAAACCGCGAGTATCTGGTAGTGCAGTATGAAGACGGTTTGCTGCGTGTACCAGCGGATGCGTTGGAACTGCTGTCTCGATATCGTCGCACAGGTGATCGCGCCCCTACTCTCAACAAAATGTCGGGGAAAGCCTGGGAGCGCACCAAAGATAAAGTTCGCAAGTCAGTGAAGAAGCTGGCGGTGGATTTGCTGGGGCTGTATGCGAAGCGATCGCAGCTTTCGGGTTATGCCTATCCGGCGGATGACGTTTGGCAGGAGGAAATGGAAGATTCTTTCCCCTATCAACCAACCCCGGATCAACTCAAGGCAATCCAGGATCTCAAGCGGGATTTGGAAAGCGATAGCCCGATGGATCGATTAGTATGTGGGGATGTGGGATTCGGAAAAACGGAAGTGGCGATACGCGCCATCTTTAAGGCAATTACTGCAAACAAACAAGTCGCCTTCCTCGCCCCCACAACTATCCTTACTCAGCAGCATTACCACACGCTCAAAGAGCGTTTTGCCCCCTATCCCATCAATGTGGGGTTACTCAACCGTTTCCGCACCACTGCCGAACGCCGCGACATTCACAAGCGCCTTGCCACCGGGGAACTAGATGTTGTCGTGGGAACCCACCAACTATTGAATAAAAATGTCAAATTCCATGATTTAGGGATGCTGGTGGTGGACGAAGAACAACGCTTTGGTGTTAACCAGAAAGAGAAGATTAAATCCTTGAAAACGCAGGTGGATGTTCTCACGCTCACTGCTACCCCGATTCCTCGTACTCTCTATATGTCTCTTTCCGGCATTCGGGAAATGAGCTTGATTACCACGCCACCCCCCTCTCGGCGTCCCATTAAAACCCATCTTTCCTCTTATGATTCGGAGGTAGTACGCACAGCCATTCGCAACGAACTAGATCGCGGCGGACAGGCATTCTATGTCGTGCCTCGGGTGGAAGGAATTGAAGGGGTTGCGGCAGGATTGCGAGAGATGGTTCCTGGGGCGAGAATTGCGATCGCGCACGGGCAAATGCAGGAAGGGGAGTTGGAAGCTACCATGTTGAGCTTCAACAACGCAGAAGCTGACCTCCTGGTTTGCACCACCATTATTGAGTCGGGACTAGATATCCCCCGCGTTAATACTATCGTAATTGAAGATGCCCAGAAGTTTGGGTTGTCCCAACTTTATCAGCTTCGAGGACGAGTGGGGCGTGCCGGGGTGCAGGCACACGCT
PROTEIN sequence
Length: 941
MAFSSVIRALERSPLTGELRTTLNQQQSLHLNGIPRLPKGLVASAFAQGSQQNLFVVCATLEEAGRWAAQLQTMDWQTVHFYPTSEASPYEPFDPESEMSWGQMQVLADLAIAHPEGVAIVATERSLQPHLPPPAAFQSYCLTLETGIARDSKTLDRQLTQLGYERVSLVETEGQWSRRGDIVDVFPVAAELPVRLEWFGDELEQLREFDPVSQRSLDQVKQLALTPTSFAPIIVDALRGKGGQGEKETGGQGAINALKAHLSQEEQEALEEGKLPEGMHRFLGLAFDKPASLLDYLPESTLCAIDEVEQCRAHSARWLEHTEEQWQEQGRGDPSVRPNSLPKIHRSFDESLVAAAAFQQLYLSELAEENSDAVNLSSRPIPATPHQFGKLAGMLRGEQEVYHGISLKNFSTWLISAQPSRSVALLQEHDCSAQFVPNSRDYRAIERLHTQHIPTAVKYSGLAELEGFILPTFRIVVVTDREFFGQHVLATPGYIRKRRRATSKQVDLNKLRPGDYVVHKNHGVGKFLKLESWENREYLVVQYEDGLLRVPADALELLSRYRRTGDRAPTLNKMSGKAWERTKDKVRKSVKKLAVDLLGLYAKRSQLSGYAYPADDVWQEEMEDSFPYQPTPDQLKAIQDLKRDLESDSPMDRLVCGDVGFGKTEVAIRAIFKAITANKQVAFLAPTTILTQQHYHTLKERFAPYPINVGLLNRFRTTAERRDIHKRLATGELDVVVGTHQLLNKNVKFHDLGMLVVDEEQRFGVNQKEKIKSLKTQVDVLTLTATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLSSYDSEVVRTAIRNELDRGGQAFYVVPRVEGIEGVAAGLREMVPGARIAIAHGQMQEGELEATMLSFNNAEADLLVCTTIIESGLDIPRVNTIVIEDAQKFGLSQLYQLRGRVGRAGVQAHA