ggKbase home page

sw_6_scaffold_368_21

Organism: SW_6_Oscillatoriophycideae_48_11

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(20411..20734)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034AEF8D similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 107.0
  • Bit_score: 138
  • Evalue 5.50e-30
Membrane protein {ECO:0000313|EMBL:KHD05199.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita n similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 106.0
  • Bit_score: 134
  • Evalue 1.10e-28
putative metabolite-efflux transporter yvaE similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 106.0
  • Bit_score: 133
  • Evalue 3.80e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGAGCTGGATTTATCTATGTTTAGCCATTGTTTTTGAAGTATCGGGCACTACTTCTATGAAACTATCGCAAGGTTTTGCGAATATAGTTCCCTCCATCTCAATGATCGTCTTCTACGCTCTAAGTTTGAGCTTTTTAACACTTGCTGTGAATACAATTGATGTCGGAGTTGCCTATGCCACCTGGACTGGTTTAGGAACTGCTTTGATTGCAACTATTGGAATTGTTTGGTTTAAGGAGCCGGCAACTGCATTAAAACTAATCTCGCTGAGTTTAATTATAATCGGCGCGATCAGTTTGAACCAAAGTGGCGCAAACCATTAA
PROTEIN sequence
Length: 108
MSWIYLCLAIVFEVSGTTSMKLSQGFANIVPSISMIVFYALSLSFLTLAVNTIDVGVAYATWTGLGTALIATIGIVWFKEPATALKLISLSLIIIGAISLNQSGANH*