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sw_6_scaffold_517_6

Organism: SW_6_Oscillatoriophycideae_48_11

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(4789..5874)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DEW4_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 368.0
  • Bit_score: 479
  • Evalue 2.60e-132
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:ERN43038.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KOR similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 368.0
  • Bit_score: 479
  • Evalue 3.60e-132
type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 369.0
  • Bit_score: 478
  • Evalue 1.60e-132

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Taxonomy

Rubidibacter lacunae → Rubidibacter → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGTTGCAGCCTCTCAAACGCCTTCTAGATAGAAAAAACCGAGGGATTGGTGTCGAAATTACGCCAGAACGAATTAATATTGCGCAACTGCGTAGCTCAGAACGGGGTTATCAACTCACCACCTTCTCATCACTAGAAGTGCCTGAAGAAATATTTGAGGAGGGGCAGATTGCTGATGTCACCGCCCTCGCTGAATTGCTTAAGCAAGCGCTCAGTGCAAAAAAGCTGAAAGTCACCAAAGTGGCTACGGCAGTGCCAACGCGAGACTCGATTAGCCGCATCATTTCTGTTCCCGCCGAACTAGATGATCAAGAACTGCGCGAGGTTGTTATCAATCAAGAAGCAAATCTCTGCTTGCCCTATCCCCGCGAAGAAGTTGATTTAGATTATCTGAAGCTGGGTTACTTCGAGGATGAGGATGGCATCGAAAAGGTGCAAGTTCTGCTCGTTGCCACTAAACGGGAAGTAACAGACACCTATCTAGAAGTCTTCCAGCAAGCGGGTTTAGAAACAGATGTCTTAGAAATTAACAGCTTCGCCCTCCTTCGGACGGTTAGAGAGCAACTGCGGCAGTTTGGCTCTTTAGAAGCTGCCGTACTTGTCGACATTGAGTTTGACAACACCGAAATTGCCATTCTCGTCGAGGGGGTTCCGCAATTTAATCGCACTGTACCGATTGGAACCTATCAACTTCAAAGCGCTCTCTCCCGAGCCATGAATTTACCTACTTCTAGAAACACCGAATTTCTCCAAGAATTTTCTATTCCCGAGCCTGGGAATAATCTTCCCAAAGGGATGGCAGTTTTGCAGAAAATGTTAGGAGAATTAAGTGATGAAATACGCCGCTCGATTGATTTTTATTTGAGTCAGAGTGAGGGGATAGAAATCGCTCAGCTTTTACTAGCTGGTCCTGGCGGCGGAATTGAAAAACTGGATGATTTTTTTACGCAGCGGTTGGACTTTGCAGCGGCTTCAGTTGATCCTGTGGCAGCCCTCTCTTTGCAAACAGAAGAAGAAATTCCGAAGGCAAAACGGTCAGGATTAGGAACTGTGATTGGGTTAGGACTGCGCGAGATTAATTCGTAA
PROTEIN sequence
Length: 362
MLQPLKRLLDRKNRGIGVEITPERINIAQLRSSERGYQLTTFSSLEVPEEIFEEGQIADVTALAELLKQALSAKKLKVTKVATAVPTRDSISRIISVPAELDDQELREVVINQEANLCLPYPREEVDLDYLKLGYFEDEDGIEKVQVLLVATKREVTDTYLEVFQQAGLETDVLEINSFALLRTVREQLRQFGSLEAAVLVDIEFDNTEIAILVEGVPQFNRTVPIGTYQLQSALSRAMNLPTSRNTEFLQEFSIPEPGNNLPKGMAVLQKMLGELSDEIRRSIDFYLSQSEGIEIAQLLLAGPGGGIEKLDDFFTQRLDFAAASVDPVAALSLQTEEEIPKAKRSGLGTVIGLGLREINS*