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SW_6_Oscillatoriophycideae_48_11

In projects: SW_6

Consensus taxonomy: Oscillatoriophycideae  →  Cyanobacteria  →  Bacteria

Taxonomy override: Cyanobacteria

Displaying items 1-50 of 266 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_3813
Species: Halothece sp. PCC 7418 (100%)
2 3033 bp 50.15 6.59 90.11
sw_6_scaffold_3799
Class: Oscillatoriophycideae (50%)
6 3042 bp 45.89 16.40 62.92
sw_6_scaffold_3709
Order: Oscillatoriales (66.67%)
3 3097 bp 50.40 9.88 73.33
sw_6_scaffold_3703
Class: Oscillatoriophycideae (50%)
4 3099 bp 48.02 8.33 49.27
sw_6_scaffold_3628
Order: Chroococcales (50%)
4 3156 bp 48.48 11.25 74.33
sw_6_scaffold_4402
Phylum: Cyanobacteria (50%)
4 3245 bp 47.46 21.05 70.72
sw_6_scaffold_3443
Phylum: Cyanobacteria (50%)
4 3273 bp 50.53 10.57 41.12
sw_6_scaffold_3435
Phylum: Cyanobacteria (60%)
5 3277 bp 44.92 11.53 63.63
sw_6_scaffold_3418
Order: Oscillatoriales (50%)
4 3291 bp 45.27 9.36 71.65
sw_6_scaffold_7790
Species: Oscillatoria nigro-viridis (100%)
1 3302 bp 47.79 4.91 54.79
sw_6_scaffold_3344
Phylum: Cyanobacteria (83.33%)
6 3354 bp 47.73 10.26 73.17
sw_6_scaffold_3168
Class: Oscillatoriophycideae (60%)
5 3491 bp 48.01 9.94 98.57
sw_6_scaffold_3095
Phylum: Cyanobacteria (60%)
5 3547 bp 50.16 11.39 75.95
sw_6_scaffold_3086
Phylum: Cyanobacteria (66.67%)
3 3553 bp 48.10 11.12 74.89
sw_6_scaffold_3063
Species: Dactylococcopsis salina (50%)
2 3575 bp 46.18 10.80 55.64
sw_6_scaffold_4920
Class: Oscillatoriophycideae (50%)
6 3595 bp 48.51 11.35 85.29
sw_6_scaffold_2980
Species: Coleofasciculus chthonoplastes (66.67%)
3 3651 bp 46.95 10.65 64.17
sw_6_scaffold_9512
Class: Oscillatoriophycideae (60%)
5 3658 bp 48.06 11.02 57.49
sw_6_scaffold_3919
Order: Oscillatoriales (50%)
4 3660 bp 44.84 13.50 48.03
sw_6_scaffold_3737
Species: Pleurocapsa minor (50%)
4 3687 bp 47.90 10.44 53.70
sw_6_scaffold_2937
Class: Oscillatoriophycideae (66.67%)
3 3696 bp 50.70 10.63 89.04
sw_6_scaffold_2934
Species: Pleurocapsa minor (50%)
4 3697 bp 48.61 9.79 82.85
sw_6_scaffold_5551
Species: Tolypothrix bouteillei (50%)
2 3757 bp 51.02 14.22 60.69
sw_6_scaffold_2731
Species: Pleurocapsa minor (50%)
4 3897 bp 47.96 11.29 64.51
sw_6_scaffold_2716
Order: Chroococcales (50%)
6 3917 bp 47.41 9.68 77.13
sw_6_scaffold_2660
Order: Oscillatoriales (60%)
5 3991 bp 48.43 9.90 84.94
sw_6_scaffold_2569
Order: Oscillatoriales (75%)
4 4089 bp 50.79 9.81 82.25
sw_6_scaffold_5208
Class: Oscillatoriophycideae (57.14%)
7 4111 bp 48.11 11.46 89.91
sw_6_scaffold_2532
Order: Nostocales (66.67%)
3 4129 bp 49.43 15.35 91.55
sw_6_scaffold_4338
Phylum: Cyanobacteria (80%)
5 4165 bp 49.56 9.72 76.64
sw_6_scaffold_2508
Order: Oscillatoriales (60%)
5 4166 bp 47.02 10.56 71.22
sw_6_scaffold_2505
Class: Oscillatoriophycideae (66.67%)
3 4168 bp 47.50 11.40 84.21
sw_6_scaffold_2500
Phylum: Cyanobacteria (66.67%)
9 4172 bp 47.60 10.38 79.31
sw_6_scaffold_2488
Species: Coleofasciculus chthonoplastes (50%)
4 4186 bp 47.75 10.97 69.09
sw_6_scaffold_2405
Class: Oscillatoriophycideae (60%)
5 4299 bp 49.43 11.17 86.88
sw_6_scaffold_2364
Order: Oscillatoriales (50%)
6 4355 bp 49.02 9.51 83.49
sw_6_scaffold_2361
Order: Oscillatoriales (50%)
4 4357 bp 51.25 11.82 62.93
sw_6_scaffold_2327
Order: Oscillatoriales (66.67%)
3 4400 bp 48.16 11.75 64.30
sw_6_scaffold_3575
Class: Oscillatoriophycideae (50%)
6 4422 bp 44.84 12.60 35.82
sw_6_scaffold_2287
Phylum: Cyanobacteria (50%)
4 4456 bp 46.59 11.40 81.26
sw_6_scaffold_2233
Species: Dactylococcopsis salina (66.67%)
3 4550 bp 50.92 9.36 93.63
sw_6_scaffold_3409
Species: Microcoleus sp. PCC 7113 (50%)
4 4663 bp 45.25 12.57 62.73
sw_6_scaffold_2822
Class: Oscillatoriophycideae (57.14%)
7 4673 bp 48.47 8.84 84.42
sw_6_scaffold_4086
Phylum: Cyanobacteria (75%)
8 4680 bp 47.56 9.72 80.17
sw_6_scaffold_5077
Class: Oscillatoriophycideae (66.67%)
3 4686 bp 49.55 12.91 94.75
sw_6_scaffold_2102
Phylum: Cyanobacteria (80%)
5 4742 bp 47.49 11.87 74.46
sw_6_scaffold_2044
Species: Cyanothece sp. PCC 7424 (50%)
2 4840 bp 49.86 9.65 86.71
sw_6_scaffold_3676
Order: Nostocales (57.14%)
7 4883 bp 47.72 12.78 53.27
sw_6_scaffold_2012
Species: Dactylococcopsis salina (60%)
5 4892 bp 49.47 11.84 95.11
sw_6_scaffold_3045
Order: Oscillatoriales (71.43%)
7 4946 bp 47.70 11.20 83.40
Displaying items 1-50 of 266 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.