ggKbase home page

sw_6_scaffold_1184_11

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(11878..12408)

Top 3 Functional Annotations

Value Algorithm Source
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_44_22b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 166.0
  • Bit_score: 159
  • Evalue 4.00e-36
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] id=5803610 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 170.0
  • Bit_score: 143
  • Evalue 2.10e-31
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 146.0
  • Bit_score: 110
  • Evalue 5.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_10_44_22b → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGCCAGAAATTGTTCAAAAAAATGATGATACCGACGTCCTTCGTGCAACCGCCGAGTTGATACAGGAAAATGAATTCGGCTCAGAAGAGCTGAAAAATATTCTTGCCGACATGAAAGAAGCCTTACACGATACAGATGACGGTGTCGCTATCGCTGCCCCCCAAATTGGTATCTCCAAACGGATTTTTTTAGTTCGTGATACCGTATTTGCCGAACGTGGTGATCTCGACACAGCTGATCATGAATTTATAAATCCTGAGCTTGTTAATACCTCACAAGCAACAGTAGAGCTTGATGAAGGGTGTCTATCCGTTCGTAATACCTATGGTAAGGTGACCAGATACAAGCAAGCCACGGTCAGGGCCTATGATATTAGTGGCGATGAATTTGAAGTTGGCGGATCTGGTCTTTTGGCCCAGATTTTCCAACAAGAGATTGAGCACTTGGACGGAACTCTTTTTGTTGATAAGGCGCGCGATCTACGGGAAATTGATCCGGAAAAAAGGACTCACATCAAAAATCGGCAATAG
PROTEIN sequence
Length: 177
MPEIVQKNDDTDVLRATAELIQENEFGSEELKNILADMKEALHDTDDGVAIAAPQIGISKRIFLVRDTVFAERGDLDTADHEFINPELVNTSQATVELDEGCLSVRNTYGKVTRYKQATVRAYDISGDEFEVGGSGLLAQIFQQEIEHLDGTLFVDKARDLREIDPEKRTHIKNRQ*