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sw_6_scaffold_2682_5

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(2483..3703)

Top 3 Functional Annotations

Value Algorithm Source
rpfA; 30S ribosomal protein S1 Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 374.0
  • Bit_score: 463
  • Evalue 3.90e-127
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 id=5803531 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 369.0
  • Bit_score: 420
  • Evalue 1.60e-114
RNA binding S1 protein similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 308.0
  • Bit_score: 255
  • Evalue 2.50e-65

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Taxonomy

R_OD1_Kaiserbacteria_49_11 → Kaiserbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGCCTCAATCAACAACTGAAGACTCAGCTGCCGAATCGACAAGTACCGACACGGTAGGCCAAGAGCCTGAGCAAGAACCGGAAGATATCAGCCAGGACCCAATCAAAAAAGATCATCTTGATGATGATCCGATGGAAACAGTGTACGAATCATCGGTAAATCGTCCGGACGTCGGCGATATTGTTGCCGGCGAAGTAATTGCAGTTGACACAGCAAGTGTTTACATTGATCTGCCGCCCCACGGCACCGGGATTATATACGGACGCGAGTATATCAACGCTCGCAATATCATCCGCAATATTACCGTCGGCGACGACATATCCGCGAAAGTCGTTGAGCCGGAAAACAACGACGGATACGTAGAACTATCCTTAAAAGAAGCTCGTCAAGCAATTGTCTGGGCTAAAGCCGAAGAGGCCATGCAGGATGAGGAGGTATTCAACCTCACGGTCAAAGACGCAAACAAGGGTGGACTGCTTCTGGACTGGGAGGGAATTCGGGGCTTTCTGCCTGCCTCTCAGCTGAAACCAGAACACTACCCTCGCGTTGAGGGTGGTGACAAGGACCGTATCCTGCAAGAACTAAAAGAGTTAGTTGGCGACCAGCTAACTGTCTCAATTATTACCGCCGACCCCGAAGAAGAAAAGTTGATTTTCTCGGAAAAAAGTCCAAGCAAAGAAGAAAAGGAGGCAGTTATGGATACGTACGAAGTTGGCGAGGTTATCGAAGGCACCGTTACCGGCATCGTGGATTTTGGGGTGTTTATCGAGATTGAAGAAGGCTTAGAAGGGCTCGCACACATCTCTGAACTGGACTGGGGGCTTGTGGAGGATCCCGGTGATCTCTTTGAGGTTGGTGAAACAGTCACCGCAAAAATTATCGATAAGGAAGAAGACCAGGTATCGCTATCGATCAAAGAGCTGAAAGAAAATCCCTGGATCGAAGCTGCTGACACCTATCACGCCGGCCAGGAGGTTAGCGGCGTCATTATCAAGTTCAATGAGCATGGAGCATTAGCCGCCATTGAAGAAGGGGTTGCTGGTTTGGTCCACGTCTCTGAGTTTGCATCAATGGAAGCATTGCGAGATACGCTTGAGCTTGGTAGAACCTATCAGTTTGAGATCAACTTATTTGAACCCCGTGAGCAGCGTATGGCCCTTTCCTACAAAGGTGATGATGGTGACGATTCCAAAGAAAACGCTGACGACAGTGACGAGTAA
PROTEIN sequence
Length: 407
MPQSTTEDSAAESTSTDTVGQEPEQEPEDISQDPIKKDHLDDDPMETVYESSVNRPDVGDIVAGEVIAVDTASVYIDLPPHGTGIIYGREYINARNIIRNITVGDDISAKVVEPENNDGYVELSLKEARQAIVWAKAEEAMQDEEVFNLTVKDANKGGLLLDWEGIRGFLPASQLKPEHYPRVEGGDKDRILQELKELVGDQLTVSIITADPEEEKLIFSEKSPSKEEKEAVMDTYEVGEVIEGTVTGIVDFGVFIEIEEGLEGLAHISELDWGLVEDPGDLFEVGETVTAKIIDKEEDQVSLSIKELKENPWIEAADTYHAGQEVSGVIIKFNEHGALAAIEEGVAGLVHVSEFASMEALRDTLELGRTYQFEINLFEPREQRMALSYKGDDGDDSKENADDSDE*