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sw_6_scaffold_2682_7

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 4087..4881

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 226.0
  • Bit_score: 256
  • Evalue 4.80e-65
id=5226921 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 224.0
  • Bit_score: 241
  • Evalue 1.10e-60
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 216.0
  • Bit_score: 200
  • Evalue 8.20e-49

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Taxonomy

R_RIF_OD1_11_46_22 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGAACAAAAAACATTTTCTGATTATCAACAGCCGATAATTGATTATCCCAATCTCGTTCGGGATCAACTAGATTCATTTCAGGAGGTTGTTGATGAAGGGATCTGGGATCTTTTTCAGGAGTTTTCGCCAATTACTGATCACAACGACGAAAAGTTTTCCTTTGAATTTGTTGATTTAGAAATTGGTGAGCCGCAAGTAACGCCGGAGTATGCTCGTCATCACGAAATGACCTACGATGCTCCGCTGCGGGCAACGATCCGTCTTGAAAATAAGTCAATCGGTTCTGAGGAAGAGCAGGAAATTTTCATGGCCGACTTTCCGCTGATGACCGACAACGGGTCATTCATTATTAACGGGGTTGAGCGAGTTATTACCCCACAGCTGATTCGTTCGTTTGGGGTTTTGTTTATAACCAACGAAAAACGCGATGGTGAATACTTTGGAGCCAAAATTGTTCCGTCCCGTGGTGCCTGGGTAGAGATTGAAAGTGACCATAACGATATGATCCATGTCCGTCTTGACCGCAAGCGAAAATTTCCGGTCACAACGCTGCTTCGTGTGATGGGAGCGGAAACCGATGAAGACATCCGCAAGCTTTTCGCTGATGATGAGCCTGTTCAGGATTATCTGGACGCAACCCTCAAAGCTGATATGGCAACCAACGAAGAGGATGAGTTGGCCGTTACCGGTTTAACGATCGTTTTGACAAAGGTACTAGTGAAGAAGATCTGCAAAAGCAGGTCATTGACCTTGATGACATTGTTACGATTGTTCGTCATATTGCCGAACTAA
PROTEIN sequence
Length: 265
MEQKTFSDYQQPIIDYPNLVRDQLDSFQEVVDEGIWDLFQEFSPITDHNDEKFSFEFVDLEIGEPQVTPEYARHHEMTYDAPLRATIRLENKSIGSEEEQEIFMADFPLMTDNGSFIINGVERVITPQLIRSFGVLFITNEKRDGEYFGAKIVPSRGAWVEIESDHNDMIHVRLDRKRKFPVTTLLRVMGAETDEDIRKLFADDEPVQDYLDATLKADMATNEEDELAVTGLTIVLTKVLVKKICKSRSLTLMTLLRLFVILPN*