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sw_6_scaffold_3806_2

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(860..1579)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25/general stress protein Ctc Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 227.0
  • Bit_score: 193
  • Evalue 4.50e-46
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=5803352 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 214.0
  • Bit_score: 170
  • Evalue 2.90e-39
rplY; 50S ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 236.0
  • Bit_score: 130
  • Evalue 7.20e-28

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Taxonomy

RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGATGAATTCTCTTACAGTTACAACTCGCGATACAGATACGGACACCGACAGTCTCCGTGAAGACGGTCAGATGCCGGCGGTGCTTTACGGGCGTGATACCGACTCAACACCAGTACAGCTGCGTACTGCTGAGTTTCTAAAGCTTTGGCAGGAAGTGGGCGGCTCATCGATTTTTAAGCTTGAGTGGGATGATGACACAAAGCCGGCACTTATACAAGATGTCGATCTGCATCCGGTCACCGACCAGCCAATCCATGCTGATTTTCTTGTTTTAGAAGAAGGGCAGAAGGTGACCGTTGACGTTCCGGTGGAAACGGCCGGTACTGCTCCGGCCGTCAAAAACTTGGGTGGGTTGCTCGTGCAGGTTATGCGTACGGTTGAAATTGAAGCCGACCCGGAAAACTTGCCGGATGTTGTTGAGGTAGATGTAACCGACTTAGAAGAATTCGGTGATCAGGCAACCGTTGATGACATAACGTCTCCGGATGGTGTCTCCATTCTTGAGGACAAAAAAGACGTTGTTGTGCTTATTGAAGAACCCGAAGAGCTTGAGGAGCTTGAACCCGAAGAAGACGAGGAAGAGCTTGACTTCGAAGACATTGAGGTTGAAGGCGAAAAAGACGAAGACGAACTTGAAGGTGAAGGTGGGGAGGGCGAAAGTGAAGGCGAGGAGGCTGCCGAAGGTCAAGAGGATCGAGGGCAGGAAACAGGTGAGTAG
PROTEIN sequence
Length: 240
MMNSLTVTTRDTDTDTDSLREDGQMPAVLYGRDTDSTPVQLRTAEFLKLWQEVGGSSIFKLEWDDDTKPALIQDVDLHPVTDQPIHADFLVLEEGQKVTVDVPVETAGTAPAVKNLGGLLVQVMRTVEIEADPENLPDVVEVDVTDLEEFGDQATVDDITSPDGVSILEDKKDVVVLIEEPEELEELEPEEDEEELDFEDIEVEGEKDEDELEGEGGEGESEGEEAAEGQEDRGQETGE*