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sw_6_scaffold_479_8

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 6087..6581

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 150
  • Evalue 1.80e-33
50S ribosomal protein L10 id=5226868 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 160.0
  • Bit_score: 143
  • Evalue 1.50e-31
rplJ; 50S ribosomal protein L10 similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 156.0
  • Bit_score: 89
  • Evalue 7.40e-16

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Notes

OD1? Kari Finstad (2/6/15)

Taxonomy

RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGCATTAACACGACCAGAAAAAAAGGAAATTCTTGATGAATTAGCTGATACGTTTGCGGATGTTGAAACAGTTACTTTCGTGCGCTTTGATGGGCTGAATGTTGACCGGATGGAGCAACTGCGTACAGCATTGCGTGAAGAGGATGTGCAGTTGCAAGTAGTGAAAAAGACCTTGCTTAATTTAACTTTGGATGATGTTGATGTTGACGGCGATCGGCCGGAGCTGCCCGGAAAGATTGCGTTTGCCTACGGAGGAGACGTTACAGCACCGGCACGCAGTGTGTATCAGTTTGAAACGGACGAGGAAGCCGGGGAGACGCTGGAGATTGTTGGCGGGATTTTTGAGGGGCGGTATCGTGATAAAGAAGCGATGAACGAAATAGCTCAGATTCCGGGCGCAGATGAACTGCGTGGTATGTTTGTCAACGCAATTGCATCACCGTTGAATGGGTTTGCGGTTACATTAAACGAACGAGCAAAACAGCTTGAGTAA
PROTEIN sequence
Length: 165
MALTRPEKKEILDELADTFADVETVTFVRFDGLNVDRMEQLRTALREEDVQLQVVKKTLLNLTLDDVDVDGDRPELPGKIAFAYGGDVTAPARSVYQFETDEEAGETLEIVGGIFEGRYRDKEAMNEIAQIPGADELRGMFVNAIASPLNGFAVTLNERAKQLE*