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sw_6_scaffold_787_4

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 3360..4166

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_43_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 261.0
  • Bit_score: 274
  • Evalue 1.30e-70
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5803388 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 265.0
  • Bit_score: 248
  • Evalue 7.20e-63
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 238.0
  • Bit_score: 200
  • Evalue 4.90e-49

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Taxonomy

RHI_RIF_OD1_10_43_12b → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGTATTGACCATGGNNNNNNNNNNNNNNNNNNNNGGTGCGGCGTCTGCCGGTGGTGACATCACGGACGGTCTGCCGCGTGTTGAGAACCTGTTTGAAGTGCGTGAACCTGATCATCCGGCGTTGATAAGCAGCTGTGACGGAGTTGTCACGGATGTTAACGTTGAGGATGACACACTGTTTGTTCAGGTTTTGCCGGACGAAGCTGAAGACGATGAGGAAACTATCACCTACGAAGCCCCAGCCCGGCGTTCGGCGTTAGTTGCGGAGGGTGAATCAGTTACGTCCGGCCAGCTGCTTTCTGACGGGGCGGCTGATCTTGAAGAGTTGTTTGAACACGGCGGCAAAGACAAAACCCAAAGCTATATTATCCGGGAGATTCACAAGGTGTACAAGCGGCAGGGAGCATCGATCTCGCGTAAGCACCTGGAGGTGGTGGTTAAGCAGATGTTCTCTCGGTTTGAAATTACTGATCCGGGTGATACCCAGTTTACGGTCGGTGATGTGGTCGAAGAGGCGGACCTTCGAGCCGAAAATGACCAGAAACGAGACGCCGGCAAACAGCCGGCTGAGGCTGATCGGCTGCTAAAAGGAATTAGCCGTGTTGCTTTGTCCCGCAGCAGCTTCCTGTCAACCGCTTCTTTCCAGCACACAACACGAACCCTTATTGACGCGTCGGTCCGCGGTAGCGAAGATACACTTGAGGGCCTCAAGGAGAATGTGATTGTCGGCCGCAAGATTCCTGCCGGCACCGGCTTTTCGGGTAGTCCGAAAGAAGAAATGATCGAGACTCGGGTCGACAAGTAG
PROTEIN sequence
Length: 269
MVLTMXXXXXXXGAASAGGDITDGLPRVENLFEVREPDHPALISSCDGVVTDVNVEDDTLFVQVLPDEAEDDEETITYEAPARRSALVAEGESVTSGQLLSDGAADLEELFEHGGKDKTQSYIIREIHKVYKRQGASISRKHLEVVVKQMFSRFEITDPGDTQFTVGDVVEEADLRAENDQKRDAGKQPAEADRLLKGISRVALSRSSFLSTASFQHTTRTLIDASVRGSEDTLEGLKENVIVGRKIPAGTGFSGSPKEEMIETRVDK*