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sw_6_scaffold_913_6

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(3536..4702)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=5803372 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 386.0
  • Bit_score: 369
  • Evalue 4.00e-99
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-) similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 379.0
  • Bit_score: 304
  • Evalue 5.90e-80
tRNA-specific 2-thiouridylase MnmA {ECO:0000313|EMBL:KKR53704.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 387.0
  • Bit_score: 386
  • Evalue 3.40e-104

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Taxonomy

GWA1_OD1_40_21 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGGACCTACCCAATCATATTAAAAATATAGACAACAAATCAGAAAAGACGGTTTATGTGGCCATGTCCGGTGGTGTTGATTCATCAACCTCGGCGGCACTGCTGAAACAAGCAGGTTTCCATGTTGTTGGTTGCTTTATGTCTGTCTGGCAGCCACCGTTTTTGGACTGCTCAATGGAGGCCGAACGTCAGGATGCCATGGATGTTGCTGCTCAATTAGGAATTGATTTCCGTACAGTTGATCTGGTTGAAGAATACAAAAATCGGGTCGTTGATTATATGGTGTCTGCGTACAAGTCAGGCCGAACACCGAACCCGGACGTGATTTGTAATGGGCAGATTAAGTTCGGGGCTTTCTATGAGTGGGCAGGAAATCAGGGAGACATGGATTACATTGCGACCGGACACTACGCCCGCCTTCGGCGGGAAACTCAAAACTCAAAATTCAAAATTAAAAACTCTCATCTACTCCAAGGGGTAGATGAACATAAGGATCAGACATATTTTCTGTACAGAATTGGTCAAAAACAACTGCAGGATACGCTATTTCCAATCGGACATCTTCAAAAAGAGGAAGTTCGCACATTAGCAGATGAGCTTGACGTACTGGTTGCTGATAAACCAGACAGCCAGGGTTTATGTTTCCTTGGTGAGGTCGATATGAAAGATTTTTTGTCTCAGTTTATTGACCTTAAATCCGGTAATGTGTGTAATGAAGACGGTGAAGTTATCGGTACTCACGAAGGAGCCGAAGTATATACAATTGGCCAGCGTCGTGGTTTTGAAGTGACTAAAAAAGAACCAAGTAGTGGTCCGTGGTATGTGATTGATAAAAATATTCAAAATAACACGATCACTCTCACGGAAAATAACAGCCCAGATGGGCCTGTGTATAACGGTAAAGAAATAACGCTCACTGATACGAACTGGATAACTTCACAGCCAACTGCGGGTAGGTACAAAGCTCGAATTCGTTATAACCAACCACTGGAAAAATGTAAATTAAAAGTCAAAAGTCAAACTCCGAACCAGTTCGGTTCAGGGCATGAGGCAAGAGTAATATTTGATAAACCATTGCGAGCGGTAGCTTCTGGTCAGTCGTGTGTGGTGTATGACAGTGAGGTTTGTTTGGGGGGAGGGATAATTCAGGAATTGAATAGTGAGTAG
PROTEIN sequence
Length: 389
MDLPNHIKNIDNKSEKTVYVAMSGGVDSSTSAALLKQAGFHVVGCFMSVWQPPFLDCSMEAERQDAMDVAAQLGIDFRTVDLVEEYKNRVVDYMVSAYKSGRTPNPDVICNGQIKFGAFYEWAGNQGDMDYIATGHYARLRRETQNSKFKIKNSHLLQGVDEHKDQTYFLYRIGQKQLQDTLFPIGHLQKEEVRTLADELDVLVADKPDSQGLCFLGEVDMKDFLSQFIDLKSGNVCNEDGEVIGTHEGAEVYTIGQRRGFEVTKKEPSSGPWYVIDKNIQNNTITLTENNSPDGPVYNGKEITLTDTNWITSQPTAGRYKARIRYNQPLEKCKLKVKSQTPNQFGSGHEARVIFDKPLRAVASGQSCVVYDSEVCLGGGIIQELNSE*