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sw_6_scaffold_2451_2

Organism: SW_6_Salinibacter_ruber_64_70

partial RP 32 / 55 MC: 1 BSCG 34 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 459..1043

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H540_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 194.0
  • Bit_score: 314
  • Evalue 5.90e-83
rpoE; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 194.0
  • Bit_score: 314
  • Evalue 1.70e-83
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH23145.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 194.0
  • Bit_score: 314
  • Evalue 8.30e-83

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGCCTGATGCCCGTCTGTTCGACGAGTGGTGCCGGCGCCTGAAGGCGTCGGACCGGTCGGCGTACGCCGAGGTCTTCGACGAAATGTACGAGCCGCTCTTCCGGTACGTCCGGTCGATCACGCAGTCGCCGGAGGCCGCCCAGGACGTGACGCAGGATGCATTTATCCGGCTGTGGGAGGTGCGCGATTCGCTAAGCCTGAATCAATCATTGGAGGCCTATCTCTACCGCATCGCCCGCAACCGGGCCTACAACTACGAGCGCAACCAGCGCACGCGGAGCGAGAAGGAGGCGGACGTGCGCGAGAAGACGCCCGCTCAGCCCGCTCCACCGACGCGCCCCGACGCGCAGGCCAGTGCCCAGCGGCTCGAAGACCGGCTCTGGCAGTGGATCGGCGAGCTCACCGAGCGGCAACGCGAGGCCCTCGTGCTGAGCCGCTTCGACGGCCTGAGTCACGACGAAGTGGCGGAGGTGATGGACATCTCGCCGCGGACGGTGAACAACCACATCGTCCGGGCCCTGAAGCACCTGCGCGGGCGCATCGACGACTACGAACCCGACCTGCTGGATCGCGATGAGCACTGA
PROTEIN sequence
Length: 195
MPDARLFDEWCRRLKASDRSAYAEVFDEMYEPLFRYVRSITQSPEAAQDVTQDAFIRLWEVRDSLSLNQSLEAYLYRIARNRAYNYERNQRTRSEKEADVREKTPAQPAPPTRPDAQASAQRLEDRLWQWIGELTERQREALVLSRFDGLSHDEVAEVMDISPRTVNNHIVRALKHLRGRIDDYEPDLLDRDEH*