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sw_6_scaffold_4790_4

Organism: SW_6_Salinibacter_ruber_64_70

partial RP 32 / 55 MC: 1 BSCG 34 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 1564..2103

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=761659 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 226
  • Evalue 3.60e-56
2'-5' RNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9I0_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 226
  • Evalue 2.60e-56
ligT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 226
  • Evalue 7.20e-57

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGCGGCTGTTCACAGCGATCGAGATTCCCGAGCCTCTGCGTGAGTCTCTTTCGGCGATCCAGGACCCAGACGCCCTCCAGGCCCGGTGGACCGATCCCGAACAGTTTCACGTCACCCTCCGCTTCATTGGTAACGTGGAGGAGGCCCAGGCCGCCCGCTACGAAAAAGCCCTCGCGGACGTGAACGCAGGCCCCGTACAGTGCGACCCGTGCGGCCTCGATGTCCTTCCGTCCCGCCGTTCTCCTCGGGTCCTCATGCTCGGGCTGGAGCGCACCGACTCCTTGATGGCCCTCTACGACGCCGTGAGCGATGGACTCGAAACGGAAGGCTTGGAGGCCGAAGACCGTGCCTATCGGCCCCACGTCACCATCGGCCGACTGGACGAGGCCGACCCAGACGCCGTCCACGACTACCTCCGTCTCCACGAGGACCGTTCGTTTCCAAACTTCAAGGTCGATCGCGTTGTGCTCTACGAGAGCACCCTGACGCCGGAGGGGGCGATCTACGAACCGCAAGCCATGTATCCGCTTGATGCCTGA
PROTEIN sequence
Length: 180
MRLFTAIEIPEPLRESLSAIQDPDALQARWTDPEQFHVTLRFIGNVEEAQAARYEKALADVNAGPVQCDPCGLDVLPSRRSPRVLMLGLERTDSLMALYDAVSDGLETEGLEAEDRAYRPHVTIGRLDEADPDAVHDYLRLHEDRSFPNFKVDRVVLYESTLTPEGAIYEPQAMYPLDA*