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sw_6_scaffold_5076_3

Organism: SW_6_Salinibacter_ruber_64_70

partial RP 32 / 55 MC: 1 BSCG 34 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(2186..2398)

Top 3 Functional Annotations

Value Algorithm Source
cspC; cold-shock DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 70.0
  • Bit_score: 138
  • Evalue 5.90e-31
cspC; cold-shock DNA-binding protein; K03704 cold shock protein (beta-ribbon, CspA family) id=24658885 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 71.0
  • Bit_score: 138
  • Evalue 2.10e-30
'Cold-shock' DNA-binding domain {ECO:0000313|EMBL:CBH24080.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 70.0
  • Bit_score: 138
  • Evalue 2.90e-30

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 213
ATGGAGACAGGAACCGTCAAGTGGTTTAGTCCGGCCGAAGGATATGGATTCGTTGAGCCCGACAATGGAGAGGACGACGTCTTTCTCCATCACAGTGAGGTGCCCGACGAAGACCTGGAAGAAGGTGATCGGCTCGAGTTCGAAGTCGAGGAGACCGAGAAGGGACTAAACGCCACCAACATTCAACCCATTACCGGACAACCGGAGTGGTAA
PROTEIN sequence
Length: 71
METGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDEDLEEGDRLEFEVEETEKGLNATNIQPITGQPEW*