ggKbase home page

sw_6_scaffold_688_7

Organism: SW_6_Halobacteriales_68_112

partial RP 28 / 55 MC: 3 BSCG 23 / 51 MC: 1 ASCG 28 / 38
Location: 4778..6445

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0 similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 574.0
  • Bit_score: 651
  • Evalue 1.10e-183
DNA ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ81_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 574.0
  • Bit_score: 651
  • Evalue 7.60e-184
CDC9; ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 557.0
  • Bit_score: 457
  • Evalue 4.60e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halogeometricum pallidum → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1668
ATGGAGTACGCCACGCTGGCGGCCGTCTACCGGTCGGTGGAAGCGACGCAGGCCGACACGGAGAAGACGGCCGCGCTGGCGGACCTGTTTCGTGACGCCGGTGATCTCCTGCCGGTGGTCGTCCGACTCGCACGCGGGAAGGTGTACCCGCGCTACGCGGCCACCGACCTCGGCGTCTCGTCGTCGCTGACGCAGGCGGCCGTCGAGAAGGCTACCGGCGTCGACGCCAACCGCATCGAGGAGTGGTGGAAGGAGACGGGCGATCTGGGCGCGGCGGCGGAACGCGCCGTGGCGGAGCGAACCCAGCAGACGCTCGCCTCGACGCCGCTGACCGTCGAGCGCGTCCACGACACGCTCCGCGAGTTGGCGGAGTACGAGGGAGCCGGCAGTCAGGAGCGAAAGGTCGACGCTGTCGCCGGGCTGGTGAGCGACGCCGACCCGGCAGAGGCGCGGTTCGTCGTCCGGACGGCACTCGGTCACCTCCGCATCGGCGTGGGTGACGGCACGGTACGAGACGCGCTCGCCACAGCGTTCGAGGTACCCGTCGACGCGGTCGAACGCGCCCACCAGTTGACGAACGATGTCGCGCTCGTCGCGGAGACGGCCCGCGACGAGGGAGAGGCAGGCCTGCACGAACTCGACGTGGAACTGTTCCGGCCCGCAGAGGCGATGCTCGCGCGGGCGGCCGACGACCTCGAAGCCGGACTCGCCGACGTGGGAACCGGCGACACGGCGTACCTCGAAGTCAAGTACGACGGCGCGCGCGTCCAACTCCACAAGGATGGCGACGACGTTCGGGTGTTCACCCGGCGAATGGAGGACGTGACCGCGCAGTTCCCTGACGCCGTCGAGGCCATCCGAGCCGGTGTCGACACCGACCGCTGCATCCTCGACGGGGAGCTGGTCGGCTACGACCCAGACACGAGCGACCCGGTCGCGTTCCAGCGATTCTCGAAGCGCATCAAGCGGAAGTACGGCGTCGAGGAACTGGCCGCGGAGATACCGGTGACGCTCCACCTCTTCGACTGCCTCCACGACGGCGACTCGCTGCTCGGCGAGCCGCTCGCGGCGCGACTCGACCGGCTGGACGCCCTCATCGACCCGATTCCCGGCGACATCGAGCGGGCGCGACACCTGACACCCGACGGGCCGGACGCGGCCGAGACGTTCTACCGCGAGGCGCTCTCGGCCGGCCACGAGGGCGTGATGTGCAAGAATCCGGAGGCGGCGTACACGCCCGGCCGGCGCGTGGACACGATGGCGAAGGTGAAGCCGACGATGGAGCCGCTCGACCTCGTCGTGACCCGCGCGAAGTACAGCGAGGGGCGTCGCTCCGAACAGCTCGGCCGGCTGTATCTCGCCTGTTACGACGCCGACCGGGACGCGCTCCGCGAGGTGGGACGGCTCTCGACCGGCTACACGGACGAGGAGTTGGCCGCGCTGACCGAACGACTGGAGCCGCTGATCCGCGAGCGCGACGGCCGCGACGTGGACCTCGACCCGGAAGTCGTCCTCGAAGCCGAGTACGAGGAGATACAGGAGTCCACGGAGTACGGCTCCGGCTACGCGCTCCGATTCCCGCGCTTTCTCGGGGTGCGCGAGGACCTCGCGCCGACGGACGCCGACACCCACGAGCGCGTCGAGCGACTGTACGAGGAGCAACGATGA
PROTEIN sequence
Length: 556
MEYATLAAVYRSVEATQADTEKTAALADLFRDAGDLLPVVVRLARGKVYPRYAATDLGVSSSLTQAAVEKATGVDANRIEEWWKETGDLGAAAERAVAERTQQTLASTPLTVERVHDTLRELAEYEGAGSQERKVDAVAGLVSDADPAEARFVVRTALGHLRIGVGDGTVRDALATAFEVPVDAVERAHQLTNDVALVAETARDEGEAGLHELDVELFRPAEAMLARAADDLEAGLADVGTGDTAYLEVKYDGARVQLHKDGDDVRVFTRRMEDVTAQFPDAVEAIRAGVDTDRCILDGELVGYDPDTSDPVAFQRFSKRIKRKYGVEELAAEIPVTLHLFDCLHDGDSLLGEPLAARLDRLDALIDPIPGDIERARHLTPDGPDAAETFYREALSAGHEGVMCKNPEAAYTPGRRVDTMAKVKPTMEPLDLVVTRAKYSEGRRSEQLGRLYLACYDADRDALREVGRLSTGYTDEELAALTERLEPLIRERDGRDVDLDPEVVLEAEYEEIQESTEYGSGYALRFPRFLGVREDLAPTDADTHERVERLYEEQR*