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sw_6_scaffold_11

Search features with annotation key words

Displaying items 61-90 of 119 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_11_61
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(51088..51618)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXR9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49230.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_11_62
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(51671..52522)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAB6_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14638.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_6_scaffold_11_63
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(52523..52942)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YS15_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51785.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_6_scaffold_11_64
unknown

Not on your lists

comp(53122..53451)
DNA (330bp) protein (110aa)

This feature has no annotations

sw_6_scaffold_11_65
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(53546..54802)
DNA (1257bp) protein (419aa)
Flavin-containing amine-oxidoreductase n=2 Tax=Haloarcula hispanica RepID=G0HVB6_HALHT
flavin-containing amine-oxidoreductase
Phytoene dehydrogenase {ECO:0000313|EMBL:AHB65155.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_6_scaffold_11_66
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(54902..56053)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7V7_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG00181.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_6_scaffold_11_67
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

56327..57517
DNA (1191bp) protein (397aa)
Threonine synthase n=1 Tax=Halobacterium sp. DL1 RepID=G4IGX8_9EURY
Threonine synthase {ECO:0000313|EMBL:AHG03345.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
threonine synthase
sw_6_scaffold_11_68
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(57541..58503)
DNA (963bp) protein (321aa)
Transcription initiation factor IIB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL42_NATM8
tfbA3; transcription initiation factor TFB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_6_scaffold_11_69

Not on your lists

58722..59225
DNA (504bp) protein (168aa)
Probable non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Probable non-canonical purine NTP phosphatase n=1 Tax=halophilic archaeon DL31 RepID=G2MHR3_9ARCH
hypothetical protein
sw_6_scaffold_11_70
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(59209..61047)
DNA (1839bp) protein (613aa)
Glycosyl transferase family 2 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P4_HALMD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV49134.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_6_scaffold_11_71
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

61297..62187
DNA (891bp) protein (297aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=348780 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DAPA_NATPD
sw_6_scaffold_11_72
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

62184..62927
DNA (744bp) protein (248aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=348780 spec
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DAPB_NATPD
sw_6_scaffold_11_73
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

62924..63757
DNA (834bp) protein (278aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase {ECO:0000313|EMBL:ELZ06729.1}; EC=2.3.1.117 {ECO:0000313|EMBL:ELZ06729.1};; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BAP1_9EURY
sw_6_scaffold_11_74
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

63754..64974
DNA (1221bp) protein (407aa)
odc; ornithine decarboxylase (EC:4.1.1.17 4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JZY3_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
sw_6_scaffold_11_75
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

65016..66092
DNA (1077bp) protein (359aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GTC2_9EURY
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:ELZ74818.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halo
sw_6_scaffold_11_76
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

66132..66638
DNA (507bp) protein (169aa)
PUA domain containing protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZI74_9EURY
PUA domain containing protein {ECO:0000313|EMBL:EJN60415.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative RNA binding protein
sw_6_scaffold_11_77

Not on your lists

66796..67194
DNA (399bp) protein (133aa)
Nascent polypeptide-associated complex protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XR77_9ARCH
nac; nascent polypeptide-associated complex protein
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_6_scaffold_11_78
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

67191..67931
DNA (741bp) protein (247aa)
gcd14; tRNA (adenine-N1-)-methyltransferase (EC:2.1.1.36)
tRNA (Adenine-N1-)-methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JES5_HALVA
tRNA (Adenine-N1-)-methyltransferase {ECO:0000313|EMBL:EMA07647.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vall
sw_6_scaffold_11_79
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(67911..68453)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUR7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49048.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_11_80

Not on your lists

comp(68494..68823)
DNA (330bp) protein (110aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A
DNA-directed RNA polymerase subunit m (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit M n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXS2_9ARCH
sw_6_scaffold_11_81
unknown

Not on your lists

68908..69957
DNA (1050bp) protein (350aa)

This feature has no annotations

sw_6_scaffold_11_82
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

69984..71279
DNA (1296bp) protein (432aa)
Multidrug resistance protein-like protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JET6_HALVA
Multidrug resistance protein-like protein {ECO:0000313|EMBL:EMA07662.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
major facilitator superfamily protein
sw_6_scaffold_11_83
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

71372..72430
DNA (1059bp) protein (353aa)
gadD; L-tyrosine decarboxylase (EC:4.1.1.15)
L-tyrosine decarboxylase {ECO:0000255|HAMAP-Rule:MF_01610}; Short=TDC {ECO:0000255|HAMAP-Rule:MF_01610};; EC=4.1.1.25 {ECO:0000255|HAMAP-Rule:MF_01610};; TaxID=348780 species="Archaea; Euryarchaeota;
L-tyrosine decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=MFNA_NATPD
sw_6_scaffold_11_84
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

72408..73046
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSP7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36567.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_11_85
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


73112..75238
DNA (2127bp) protein (709aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1227452 species="Archaea;
Methionine--tRNA ligase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K701_9EURY
methionyl-tRNA synthetase
sw_6_scaffold_11_86
unknown

Not on your lists

75277..75513
DNA (237bp) protein (79aa)

This feature has no annotations

sw_6_scaffold_11_87
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

75551..76111
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT49_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48685.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_11_88
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

76162..77325
DNA (1164bp) protein (388aa)
Stomatin-prohibitin-like protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IXN5_9EURY
Stomatin-prohibitin-like protein {ECO:0000313|EMBL:EMA00529.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans
stomatin-prohibitin-like protein
sw_6_scaffold_11_89
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

77363..77971
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHY9_9EURY
MarR family transcriptional regulator {ECO:0000313|EMBL:AHG03152.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteri
transcriptional regulator
sw_6_scaffold_11_90
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(77961..78203)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1K3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49093.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
Displaying items 61-90 of 119 in total

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