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sw_6_scaffold_142_17

Organism: SW_6_Halobacteriales_65_23

near complete RP 33 / 55 MC: 3 BSCG 27 / 51 MC: 3 ASCG 38 / 38 MC: 2
Location: comp(15964..16830)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 283.0
  • Bit_score: 403
  • Evalue 2.50e-109
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 283.0
  • Bit_score: 403
  • Evalue 3.40e-109
transcription initiation factor iib (tfiib) similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 295.0
  • Bit_score: 379
  • Evalue 8.20e-103

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 867
ATGAGTCAGGTGCAGTCGAAGGCCGCCTGTCCGGAGTGTAGCGGGCGACTCGAAGCGGGCGAGGAGACCTTCTGTTCCGACTGCGGGCTGGTCGTCGCCGAGGACTACCTCGATCGCGGCCCGGAGTGGCGATCGTTCAGCGACGATTCCGAGAACCGCGAGCGGACCGGCGCGCCGCTTACCCGGGCGCGTCACGATCGCGGCCTCTCGACGGAGATCGGCCGCTCGCGGGATCTCAGCTCGAAGAAGCGCCGCCAGCTCGCCCGGATGCGTCGCCAGCACAACCGCGCACGTATCTCCTCGAAGGCCGATCGCAATCGAGTGTATGCCTTCACCGAGATCCGCCGGCTGGTGAGCAGTCTCGGACTCCCCCAGTCCATCCGCGATCAGGCCTGCGTGCTCTTCGAGTCGGCCCAGTCCGCCGATCTCCTGCGCGGGCGCTCGCTGGAGGGGTTCGCCGCCGCGTCGGTCTATGCCGTCTGTCGAACCGCCGCCGTCTCCCGAACGGTGGGTGAGATCGCCGACGTCGCACGTGCCTCCGAGGCCGAACTCAAGGCCGCCTACGACGCGCTCAATCGCGAACTCGGTCTCCCTACTGGGCCGATCGACCCGGCCGAATACATCGGGCGCTTCGCGAGCCAGCTCGACGTCCCGAAGACCGTCGAGGCACGCGCACGCGAGTTCGTGACCGAAGGGCGCGAGCGCGGACTGATCAACGGGCGCAACCCGAGCGGCTTTGCCACCACCTGTCTGTACGCCGCGGCGATCGAGGCCGATCACGACCTCACCCAGCGCGAAGCCGCCGACGTCGCGGGTGTCACTCCCGTTACGCTTCGGACGGCGTACTACGACCTGATCGAGGAGTGA
PROTEIN sequence
Length: 289
MSQVQSKAACPECSGRLEAGEETFCSDCGLVVAEDYLDRGPEWRSFSDDSENRERTGAPLTRARHDRGLSTEIGRSRDLSSKKRRQLARMRRQHNRARISSKADRNRVYAFTEIRRLVSSLGLPQSIRDQACVLFESAQSADLLRGRSLEGFAAASVYAVCRTAAVSRTVGEIADVARASEAELKAAYDALNRELGLPTGPIDPAEYIGRFASQLDVPKTVEARAREFVTEGRERGLINGRNPSGFATTCLYAAAIEADHDLTQREAADVAGVTPVTLRTAYYDLIEE*