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sw_6_scaffold_7484_1

Organism: SW_6_Halobacteriales_70_17

partial RP 1 / 55 BSCG 4 / 51 MC: 1 ASCG 7 / 38
Location: comp(146..817)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=348780 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 182.0
  • Bit_score: 242
  • Evalue 7.90e-61
2'-5' RNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITD8_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 182.0
  • Bit_score: 242
  • Evalue 5.60e-61
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 182.0
  • Bit_score: 242
  • Evalue 1.60e-61

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Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 672
TTGCGGGCTCCGGTCGGCGGGAACGGTTGCCGGCGGCACGCCCGCTCCGACCCCTGCCAGGACGGCTCGTCCGCTGCCGCTGTCGCCGCCGGGATTATGCTGCCGGCCCGGCTACCGGACGGTATGCGACTGTTCGTCAGCGTCGACCTCGACGGGCTCGGCGACGCGGTGGCCGACGCACAGGCGCCGTTCCGGGACCTGCCGGGGCTGACCCCGACGGACCCCCAGCAGGCCCACGTCACGATGACCTTCCTCGGCGAGGGCGACCACGACCTCGACGCGCTCTCGACCGCCATCGAGCGCGCCGTCGACTCCGCGGGGGTCGACCCCTTCGAGACACGCTTCGAGGGACTGGGCGTGTTCCCGTCGCTTGATTACATCAGCGTCGTCTGGCTCGGCGTCGAGCAGGGCACCGAGGAACTGACCGCGCTCCACGAGGCGCTGGCGGCCGAGACGACCGCGCTGGGCTACGACCCCGATGACCACGAGTTCACGCCCCACGTCACGCTGGCGCGGATGGACCACGCCGCCGCCAAGGACGAGGTCCAGCGAGCGGTCCGGGAGCGACACCCCGAGGTCGGGACGATGACGGCCCGGGAGGTTCGGCTGACCGAGAGCCACCTGACGCCCGACGGCCCCGAGTACGAGACCGTAGCGCGGTTCCGGCTGTGA
PROTEIN sequence
Length: 224
LRAPVGGNGCRRHARSDPCQDGSSAAAVAAGIMLPARLPDGMRLFVSVDLDGLGDAVADAQAPFRDLPGLTPTDPQQAHVTMTFLGEGDHDLDALSTAIERAVDSAGVDPFETRFEGLGVFPSLDYISVVWLGVEQGTEELTALHEALAAETTALGYDPDDHEFTPHVTLARMDHAAAKDEVQRAVRERHPEVGTMTAREVRLTESHLTPDGPEYETVARFRL*