ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_6_scaffold_1106_12

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(6513..6950)

Top 3 Functional Annotations

Value Algorithm Source
Trk active potasium channel n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3W0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 145.0
  • Bit_score: 245
  • Evalue 2.50e-62
Trk active potasium channel {ECO:0000313|EMBL:EMA52233.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 145.0
  • Bit_score: 247
  • Evalue 1.60e-62
trk; trk active potasium channel similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 145.0
  • Bit_score: 183
  • Evalue 3.30e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 438
GTGGTGCTCGCGCTGCCGGACGACACGCTCACCGTGTTCGCCACACTCGTGATCCGCGAGCTCGCGCCCGACGTCGAGATCCTCGCCCGGGCGGAGGAGCCGGCGAGCATCCGGAAGCTCTACCGGGCGGGCGCGGACTACGTGCTCGCGCTCGCCACCGTCAGCGGTCGAATGCTGGCCTCCACGATCCTCGACGAGGAGGTGATGAGCTTCGACAAACAGATGGAGGTCGTCCGGATGCAGTGTCCCGGACTCGGGGGCCAGACCCTCCGGGAGGCCGACGTCCGGGCACGGACCGGCTGTACCGTGATCGCGGTCGAACGCGACGGCGAGGTCCGGACCGAGATCGGTCCCGAGTTCGAACTCCGCGACGACGACGACCTCGTGCTGGTCGGCACCGACGGGGACGTCACCCGGTTCGCCTCGCTGTTCGAGTGA
PROTEIN sequence
Length: 146
VVLALPDDTLTVFATLVIRELAPDVEILARAEEPASIRKLYRAGADYVLALATVSGRMLASTILDEEVMSFDKQMEVVRMQCPGLGGQTLREADVRARTGCTVIAVERDGEVRTEIGPEFELRDDDDLVLVGTDGDVTRFASLFE*