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sw_6_scaffold_1301_12

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(9769..14526)

Top 3 Functional Annotations

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Value Algorithm Source
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1227455 species="Archaea; Eurya similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 997.0
  • Bit_score: 1512
  • Evalue 0.0
polA2; DNA polymerase II large subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 999.99
  • Bit_score: 1197
  • Evalue 0.0
DNA polymerase II large subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBQ1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 997.0
  • Bit_score: 1511
  • Evalue 0.0

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 4758
GTGCTCGTCGCGGACTACACCCGCGCGCTGCTCGGCCGCGCGGAGTACGAGGCCCGCGAGGAGGAGGTCGAACGCTACGCCGAGGAGGTCGATCTCTACGACTCGGAGACGGGGCTCCAGTACTCGCCGAAGGACGCCGAGACGAAGTTCATCGCCCGGAATTCACCTGTGATGCTCGACGGCGAGGCCACCGGCCAAGAGGAGGTCTCGGGCTTTCGCGACCTCGAACGCGTGGCGACGAACAACCCCCGTGGCGGGATGTGTCTCGTGCTCGCCGAGGGGATCGCTCAGAAAGCCCCGAAAATCGAGCGCTACACCACCGACCTCGACGAGGTGGACTGGCCGTGGCTCGACGACCTGATCGCCGGCACCGTCGGGAACTCCACCGGGGACGAGGCCGACGATGACGATCCGGACGCTGACGGTGCCGACGCCGACGCCGACGCCGAAGCCGAGGCCGACGGCGACGAAACGGACGACCAACCGGAGCCGGCTGCCGACGCGGATTCCGACCCCGACGGACCGGTCAGACCCGAGCCATCGAGGAAGTTCCTCCGGGACCTGATCGCCGGCCGGCCGGTGTTCGGCCACCCGAGCGAGGACGGTGGGTTCCGGTTGCGCTACGGTCGCGCGCGAAATCACGGCTTCGCGACCGCCGGGGTGCATCCGGCGACGATGCATCTTGTCGACGACTTCCTCGCGGCCGGCACCCAGTTGAAGACCGAGCGGCCAGGCAAGGCCGCCGGCGTCGTGCCCGTCGACTCGATCGAGGGTCCCACCGTGCGGCTGGCGAACGGCGACGTCCGTCGGATCGACGACCCCGCGGAAGCGCTCGAACTCAGAAACGGCGTCGAGGCGATCCTCGATCTCGGCGAGTACCTCGTCAACTACGGTGAGTTCGTCGAGAACAACCACCCGCTCGCGCCGGCTTCGTACACCTACGACTGGTGGATCCAGGAGTTCGAGGCCACCGACGCGAACGTCCAGGCGCTCGCGGACTCGACGCGGGTCGACCTCGAACACCCCACTCCCGAGGAAGCGATCGAGTGGGCAACCGAATACGACGCGCCGCTCCACCCCGAGTACACCTACTGCTGGCACGACATCACTGTCGAGCAGTTCGAAACGCTCGCCGACGCAGTTGCGGCGGGCGAACTCGTCGACGGCGGACTGGCGCTCGAACCCGCGCCCGAGGTTCGAGACGCGCTCGAAGCATTGCTCGTTCCGCACAACCGGGCCGCCGACGTGCTCCGGATCGCCGAATTCCGGCCGTTCGTCCGATCGCTGGGATTCGACCCGGACCGCGAACGTACGTGGGAAGACCTCTCGATGGAAGTGCGCGAGTGGCCGAACGCGATGAAGGCCGCCTGCGAAGTTGCACCATTTGATCTCCGCGAGCGCGCCCCCACCCGAATCGGCGGCCGAATGGGGAGGCCGGAAAAATCCGAACAGCGCGAGCTCTCGCCGGCAGTCCACACCCTGTTCCCGATCGGCGAGGCCGGCGGCAACCAGCGCGACGTGAGCGAGGCGGCCGAGCACGTCCACGACGACAGCGGGGAGCGCGGTGTCGTCCCTGTCCAGGTCGGCCGGCGCGAATGCACAGAATGCGGCGAGCGGAGCCACGAAACGCGATGCCCGGACTGCGGCGGCGTCACCGAGCCACGCTACGAGTGTCGCGACTGCGAGATCGCGGTCGAACCCGACGAGTCGGGCCGAGCCGAGTGCCCGCGCTGCGGGAGCGAGGCCACCCCGACCGAGTGGCGCACGGTCGACGTCCGCGAGGAGTTCCACGACGCGCTCGACGCCGTGGGCGAGCGCGAGAACGCCTTCGACATGGTGAAGGGCGTGAAAGGGCTTACATCGGAGCTCAAGACGCCCGAACCGATGGAGAAGGGCGTCCTGCGCGCGAAGCACGGCGTTTCGTCGTTCAAGGACGGCACTGTGCGTTACGACATGACCGACCTCCCAGTGACGAGCGTCCGTCCCGCCGAGCTCGATGTCTCGGTCGATCAGTTCCGCGAGCTCGGCTACCACGAGGACATCGACGGCGAGCCGCTCCGCCACGCCGATCAACTGGTCGAACTCCGGGTCCAGGACGTCGTGCTCTCGAACGGTGCGGCCGAGCACCTCCTCCGGACGGCGGATTTCGTCGACGACCTCCTCGAACAGTACTACGGTCTCGATTCGTTCTACGGCTTCGACGATCGCGGCGACCTCGTGGGCGAGCTCGTCTTCGGGATGGCCCCCCACACCTCGGCGGCGGTCGTCGGCCGCGTCGTGGGTTTCACGAGCGCCGCAGTTGGATACGCTCATCCGTACTTTCACGCCTCGAAACGCCGTAATTGCGACGGGGATGAAGACTGCGTGATGCTTTTGATGGACGGGTTGTTGAACTTCTCGAAGGAGTACCTTCCGGACAAGCGGGGCGGAAGCGTCGCCGAGGACTCGCGGCTCGTCGCCGTCGATCCGGACGACAACGTTCGCTTCTTGACGTTCGATGGGTTCTGGCGCGAACTCGAATCGCCGATCGAAGCCGACGGGAAGTACCGAAAACGGACCTGTGTGGACGAGGGTTGGCGGACGTACACTTTCGACGAAACGTACGAAGCGTCGCTCCAGCCGATCGAGAAGGCGATTCGCTACCGTGCCGACGAGGACGAAGGGCTGCTTCGTGTGACGACGCAGTTCGGTCGCTCGGTCGAGATCACCGCCAACCACAGTCTGTTTCGGTACGACGACGGGATCGAGGAAGTGGCCGGCGACGAACTGAGTGAGGGGGACTTGCTTCTCGCGCCACGGGATCTCGATGTCGAGGCGGAGCGAACGACGATCGATGCGACCGAGTGTGTCGACGATCCGTACGTCGTCGTCGACGATCACATCGAGGATCTGCTCCGATCGGTCTGGGAAACGTTCGACCGTGGCAGCGAAGCTCACGACGCGTTCACGTCCGGTCTGTCCTACCGGCTCTCGAAGGACAAGATCGCCCACGATCGACTCGACATGATACTCGATCACGGTGACTACGCCGTTCCGAACGACGCCGAAATCGCGCTCAAGGGATCGTCGAACGGGATCACTCGAACCGTCGACATCGACGAGGAATTTGCGTGGCTCCTCGGCCTGTTCGTCGCCGAAGGAACCACGTCGAGTGTCTGTCCGGCGATCCACAATGCCGACGAGGACCTGATCGATCGTGCAGGAGCCATCATCGAAACGAAACTCGACCACGAGCCCGGACGGCGCTGGTCGAATCGTGCGTACGAACTTCGCTTTCCGGCTGTGTTTCGTGAAGTCCTCTACGATCTCGGGTTCGAACGCCGTGATTCCTATGCTGCAAGCGAAAAAGTCGTTCCCGATCCTCTCTTCCAAGCACCGCGCGAAGTCGTGCTCGCCTTTCTTCGTGGATTCATCGCCGGTGATGGCAGCGAGTCGTCGGACGACAACTACAGTTCGATAGCGTTCCATACCACGAGTGACGATGTCCGCGACGGCATCGTCTTCTTGCTCCACCGCCTCGGTCTAGTGGCGAACGTCTCGACGACAACGAATCGCAACGGAAACCGTCAGGACATTCATGCCGTCTCCGTTTCCGGCGGCGCGACCGACAACCCGCTCCGCCGCGTGCTGGACGGCGACAAATCCTATTGCCCCAAAAGTCTCGTCGTGTCCGTCCCGGACGCACTGATGGAGATCCGAGAGATGCCAATCGATGGGAGCAAACAGCTCATCCCGAAGTACCTCAAGCGTCGCGAGAACGTCTCGCTCGAAAAACTCCGAGAGATCGTCGAGGAACTGGACCGACGCGAGCTGCCGCCACCAGCCCGGAATCGTCTCAACGAACTTCGTCCGCTCATCGACGGCGATCTCTCGTATCTCCGTATCGAGGGCATCGAACGCGTCGATTACGACGGCCACCTCTACGATCTACAGGTCGGCGGCGACTCGGTCTTCCTGACGAACTGGCTCTATGCTCACAACTCGATGGACGCGCCGCTGGTGATGTCCTCGCGGATCGACCCCGCCGAGATCGACGACGAGGCCCACAACATGGACGTCGTCGATCGCTACCCGCGCGAGTTCTACGAGGCCACCCTCGACATGGCCGATCCCGGAAGCGTGGACATCGAGATCGCCGAGGCGAGCGTCGGCACCGACGCGGAGTGCACCGGCTTTCGCCACACGCACGACACGTCGGACCTCGCGCTCGGGCCGTCGCTGTCAGCATACAAGACGCTGGGCGCGATGACCGAGAAGATGGACGCCCAGCTCGAACTCGCGCGGAAGCTCCGGGCCGTCGACGAAACCGACGTCGCCGAGCGCATCATCGAATACCACTTCCTTCCCGACCTCATCGGCAATCTCAGGGCGTTCTCGCGCCAGGAAACCCGGTGTCTCGACTGCGGCACCAAGTACCGCCGGATGCCGCTCACGGGCGAGTGCCGGGAGTCACCGCCACCCGGGTCGCCGAGGAGTACGGCACCCGCGATTACACCAAACAGCGCCTCGAAGTGCTCGATCGCACTTTGGAGAGCGTGTTCGAGAACGATAAAAACAAACAGTCAGGAATCGCCGACTTCATGTAGCGAGCCTGGCGACCGATACGATCGAGACACCACGGATCTCGCACACGACTCTCGGCCGATCGTACCGGACGACTGGCGCTCCCCTTCGAACAACGGTCGTCACACGCAGGTCAGACGTTGTCCCGATCGTGGAGACGAAATCGAGGGGGCGAGAGATGATTTCATCGACTGA
PROTEIN sequence
Length: 1586
VLVADYTRALLGRAEYEAREEEVERYAEEVDLYDSETGLQYSPKDAETKFIARNSPVMLDGEATGQEEVSGFRDLERVATNNPRGGMCLVLAEGIAQKAPKIERYTTDLDEVDWPWLDDLIAGTVGNSTGDEADDDDPDADGADADADAEAEADGDETDDQPEPAADADSDPDGPVRPEPSRKFLRDLIAGRPVFGHPSEDGGFRLRYGRARNHGFATAGVHPATMHLVDDFLAAGTQLKTERPGKAAGVVPVDSIEGPTVRLANGDVRRIDDPAEALELRNGVEAILDLGEYLVNYGEFVENNHPLAPASYTYDWWIQEFEATDANVQALADSTRVDLEHPTPEEAIEWATEYDAPLHPEYTYCWHDITVEQFETLADAVAAGELVDGGLALEPAPEVRDALEALLVPHNRAADVLRIAEFRPFVRSLGFDPDRERTWEDLSMEVREWPNAMKAACEVAPFDLRERAPTRIGGRMGRPEKSEQRELSPAVHTLFPIGEAGGNQRDVSEAAEHVHDDSGERGVVPVQVGRRECTECGERSHETRCPDCGGVTEPRYECRDCEIAVEPDESGRAECPRCGSEATPTEWRTVDVREEFHDALDAVGERENAFDMVKGVKGLTSELKTPEPMEKGVLRAKHGVSSFKDGTVRYDMTDLPVTSVRPAELDVSVDQFRELGYHEDIDGEPLRHADQLVELRVQDVVLSNGAAEHLLRTADFVDDLLEQYYGLDSFYGFDDRGDLVGELVFGMAPHTSAAVVGRVVGFTSAAVGYAHPYFHASKRRNCDGDEDCVMLLMDGLLNFSKEYLPDKRGGSVAEDSRLVAVDPDDNVRFLTFDGFWRELESPIEADGKYRKRTCVDEGWRTYTFDETYEASLQPIEKAIRYRADEDEGLLRVTTQFGRSVEITANHSLFRYDDGIEEVAGDELSEGDLLLAPRDLDVEAERTTIDATECVDDPYVVVDDHIEDLLRSVWETFDRGSEAHDAFTSGLSYRLSKDKIAHDRLDMILDHGDYAVPNDAEIALKGSSNGITRTVDIDEEFAWLLGLFVAEGTTSSVCPAIHNADEDLIDRAGAIIETKLDHEPGRRWSNRAYELRFPAVFREVLYDLGFERRDSYAASEKVVPDPLFQAPREVVLAFLRGFIAGDGSESSDDNYSSIAFHTTSDDVRDGIVFLLHRLGLVANVSTTTNRNGNRQDIHAVSVSGGATDNPLRRVLDGDKSYCPKSLVVSVPDALMEIREMPIDGSKQLIPKYLKRRENVSLEKLREIVEELDRRELPPPARNRLNELRPLIDGDLSYLRIEGIERVDYDGHLYDLQVGGDSVFLTNWLYAHNSMDAPLVMSSRIDPAEIDDEAHNMDVVDRYPREFYEATLDMADPGSVDIEIAEASVGTDAECTGFRHTHDTSDLALGPSLSAYKTLGAMTEKMDAQLELARKLRAVDETDVAERIIEYHFLPDLIGNLRAFSRQETRCLDCGTKYRRMPLTGECRESPPPGSPRSTAPAITPNSASKCSIALWRACSRTIKTNSQESPTSCSEPGDRYDRDTTDLAHDSRPIVPDDWRSPSNNGRHTQVRRCPDRGDEIEGARDDFID*