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sw_6_scaffold_1854_4

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: 1474..2112

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM19_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 172.0
  • Bit_score: 337
  • Evalue 1.20e-89
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 172.0
  • Bit_score: 337
  • Evalue 1.70e-89
transcription initiation factor IIE, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 172.0
  • Bit_score: 303
  • Evalue 4.20e-80

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 639
ATGCCGAGCGGACGGTCGTCCCCCAAGAACGGGGCAAGCGTGTCGAGCACTCCGAGTGAGTTCCCGTGTCGAGCCGCGGTAAACGATGGATTTACCCGCCCCGACGCCCGAGAGCGGGCAATGGCGTTTGAGGACCTCCTCGAAGATCCCGTGGTCCAGACCTATCTCCACGAGCTCGTCGGCCCGCGTGGGATGCCCGTCGCCGCCGCGCCGCCCGACGGCGAAGTGACCGACGAGGAGCTGGCCGAGGACCTCGGCCTCGAACTCAACGACGTCCGGCGCGCGCTGTTCATCCTCTACGAGAACGACCTCGCGAGCTACCGCCGGCTCCGCGACGAGGACTCGGGCTGGCTCACCTACCTCTGGACGTTCGAGTACGAGTCGATTCCCAACAACCTCCGCGAGGAGATGCACCGGCTGCTGGAGGCCTTGGAGGAGCGTCGGAAGTACGAGCGTAACAACGAGTTCTACCTCTGTGAGGTCGACTCGCTCCGCTTCGAGTTCGGGGAGGCGATGGAGTTCGGGTTCGAGTGTCCCCAGTGTGGCTCCGCGCTCGAATCGATGGACAACGACCGGCTGATCGACGCGATGGACGAACGCATCGACGAGCTCCGCGACACGCTCACCGTCCCCGCCTGA
PROTEIN sequence
Length: 213
MPSGRSSPKNGASVSSTPSEFPCRAAVNDGFTRPDARERAMAFEDLLEDPVVQTYLHELVGPRGMPVAAAPPDGEVTDEELAEDLGLELNDVRRALFILYENDLASYRRLRDEDSGWLTYLWTFEYESIPNNLREEMHRLLEALEERRKYERNNEFYLCEVDSLRFEFGEAMEFGFECPQCGSALESMDNDRLIDAMDERIDELRDTLTVPA*