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sw_6_scaffold_2088_10

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(5342..5539)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG84_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 65.0
  • Bit_score: 135
  • Evalue 1.70e-29
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 65.0
  • Bit_score: 135
  • Evalue 2.30e-29
DNA-directed RNA polymerase subunit E, RpoE2 similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 65.0
  • Bit_score: 115
  • Evalue 6.50e-24

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 198
ATGGCCGATAGACGAGTGTGTCGCGAGTGCCACCGCGTGCTCGACTCGCCCGACCAGCAGACCTGTCCCGCGTGTGGCTCGTCGAGCCTCACCGAGGACTGGGCGGGCTACGTGGTGATCACCCATCCCGAGACCAGCCGGATCGCAGAAGAGATGGAAGTCACCGAACCGGGCCGCTACGCGCTGAAGGTCCGATAG
PROTEIN sequence
Length: 66
MADRRVCRECHRVLDSPDQQTCPACGSSSLTEDWAGYVVITHPETSRIAEEMEVTEPGRYALKVR*