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sw_6_scaffold_3632_4

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(2441..3151)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1A8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 235.0
  • Bit_score: 430
  • Evalue 1.20e-117
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 235.0
  • Bit_score: 430
  • Evalue 1.60e-117
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 234.0
  • Bit_score: 408
  • Evalue 1.30e-111

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 711
GACAAGGGCCTCTCCACGAATATCGGCTGGCAGGACAAGGACGCCTACGGCAACAGTCTCTCCAGCCGCCAGCGCCAGAAAATGCAGCGCCTCCGCACGTGGAACGAGCGCTTCCGGACGAGGGACTCCAAGGAACGCAACCTCAAACAGGCCCTCGGCGAGATCGACCGGATGGCGAGTGCGCTCGGTCTTCCGGATTCGGTGCGCGAGACCGCGAGCGTCATCTATCGGCGCGCGCTCGACGAGGACCTCCTCCCCGGACGCTCCATCGAGGGCGTCTCCACGAGCGCGCTGTACGCCGCCGCGCGCCAGGCCGGCACGCCCCGATCGCTCGACGAGATCGCCACCGTCTCCCGGGTCGGCAAGATGGAACTCACGAGGACCTACCGGTACGTGGTGCGCGAGCTCGGTCTGGAGATCCAGCCCGCCGATCCCGCGAGCTACGTCCCCCGGTTCGCCTCCGATCTCGACCTCTCCGAGGAGGCCGAACGCCGCGCTCGACAGCTCCTCGACACCGCGAAGGCCGAAGGCGTCTACAGCGGCAAGAGCCCGGTGGGGCTGGCGGCCGCCGCGGTCTACGCCGCCGCCCTCCTCACCAACGAGAAGGTCACCCAGGGAGCCGTCTCCGAGGTCGCCGACATCTCCGAGGTCACCATCCGGAATCGGTATCACGAGCTCTTGGAGGCCGAAGAGCAGGTCCAGGCTCCGTAG
PROTEIN sequence
Length: 237
DKGLSTNIGWQDKDAYGNSLSSRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDSVRETASVIYRRALDEDLLPGRSIEGVSTSALYAAARQAGTPRSLDEIATVSRVGKMELTRTYRYVVRELGLEIQPADPASYVPRFASDLDLSEEAERRARQLLDTAKAEGVYSGKSPVGLAAAAVYAAALLTNEKVTQGAVSEVADISEVTIRNRYHELLEAEEQVQAP*