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sw_6_scaffold_413_8

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(5489..5845)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 118.0
  • Bit_score: 219
  • Evalue 2.20e-54
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 118.0
  • Bit_score: 180
  • Evalue 2.30e-43
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 118.0
  • Bit_score: 219
  • Evalue 1.60e-54

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGACGATCTTCAAGGAGCGCCTCGACGAGGAGTACCTCACGCTCGCCGAGACCAAGGAGCTGCTCGCCGACGTCGAGGCCGAGCACGCCGCCGACGAGGACCGCGAGATGCCCTACGAGCTCGCGCGCGCCATCGAGCACGTCAACCGGTTCGCCGAACTCACCCCCGAGGAGTCCCGCGAGTTCGTGGCCGAGCTCCGCGAGCACGAGAAGGTCGACGAGCCGACCGCCTTCAAGATCGCGGACCTCAAACCCACCAATCGCGACGAACTCCGCGCGATCTACGCCCAGGAGCGCTTCTCGCTGTCGGGCGACGAGCTCGACGAGGTTCTCGACATCGTGGCGAAACACGTCTGA
PROTEIN sequence
Length: 119
MTIFKERLDEEYLTLAETKELLADVEAEHAADEDREMPYELARAIEHVNRFAELTPEESREFVAELREHEKVDEPTAFKIADLKPTNRDELRAIYAQERFSLSGDELDEVLDIVAKHV*