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sw_6_scaffold_5013_7

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(5573..5935)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1227456 species="Archaea similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 120.0
  • Bit_score: 228
  • Evalue 3.70e-57
endA; tRNA splicing endonuclease (EC:3.1.27.9) similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 121.0
  • Bit_score: 171
  • Evalue 1.80e-40
tRNA-splicing endonuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 120.0
  • Bit_score: 228
  • Evalue 2.70e-57

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 363
GAGGGTGCGATCGACCTTGGGGTCGACCTCGCCGCCGTCGTCGAACGCGGCCGCCGGGTCGAGGGCGAACGGTTCGACCGCCGACTCGCGGTGTACACGGCACTCCGCGAGGCGGGCCTCGTCCCGAAGACCGGCTTCAAGTTCGGCGCTGACTTCCGGACCTACGCCGACGTCGAGAGTGTCGATGACCTTGGTCACTCCGAATGGCTCGTCCGGGCGCTGCCCGCCGACCACGCGTTCGCGCCGCGCGAACTCTCGCTCGACGTCCGGCTCGCCGGCGGGGTCCACAAGCGGATGACGTTCGCGCTGACGACCCCGACCGGCGAGATCGCCTGGCTCGCTGTCGATCGACTCACGCCCTGA
PROTEIN sequence
Length: 121
EGAIDLGVDLAAVVERGRRVEGERFDRRLAVYTALREAGLVPKTGFKFGADFRTYADVESVDDLGHSEWLVRALPADHAFAPRELSLDVRLAGGVHKRMTFALTTPTGEIAWLAVDRLTP*