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sw_6_scaffold_6581_4

Organism: SW_6_Halococcus_67_27

partial RP 18 / 55 MC: 3 BSCG 18 / 51 MC: 1 ASCG 26 / 38 MC: 5
Location: comp(3132..3539)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase epsilon subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX82_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 122.0
  • Bit_score: 226
  • Evalue 1.90e-56
DNA-directed RNA polymerase epsilon subunit {ECO:0000313|EMBL:EMA49933.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 122.0
  • Bit_score: 226
  • Evalue 2.70e-56
DNA-directed RNA polymerase epsilon subunit similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 122.0
  • Bit_score: 175
  • Evalue 8.40e-42

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 408
GACTCGCCCGAAAGCGACCTCTCGGAGAACGTCCGCCGGCTCCACGATGAGCGCCACCCGGCGATGGAGGGGTACAGCCGACGCGCTCACCGCCTCGAAAAGCTCCGGCTGACCCACGCGCTGTGTGGCGATCTTTCGCTGACGCCGTGGCAGCGCGATCGCGCCATCGGGATCATGGTCGATCTCGATCTCACCGCGTTCGGGAGCCAGCGCGCGATCCCCAAGGTCGCGCTCGTCGTAATCCGCCACGTGGTTGAGCGCGAGCGCGAGCGCCACCTCGGTCTCCACGACGACGAGTGGATCGCCGAACAGTCGCCCGAGCGGCTCGCCGATCTCTACGACCAGTTCCGCTCGATCACCGATGAGGCCGCTTCGACGCGCTCTGTGCGTCCTACGACCTCGACGTGA
PROTEIN sequence
Length: 136
DSPESDLSENVRRLHDERHPAMEGYSRRAHRLEKLRLTHALCGDLSLTPWQRDRAIGIMVDLDLTAFGSQRAIPKVALVVIRHVVERERERHLGLHDDEWIAEQSPERLADLYDQFRSITDEAASTRSVRPTTST*