ggKbase home page

sw_6_scaffold_12449_4

Organism: SW_6_Salinibacter_ruber_64_10

partial RP 24 / 55 MC: 2 BSCG 23 / 51 ASCG 6 / 38
Location: comp(1225..1521)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Salisaeta longa RepID=UPI0003B48D51 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 76.0
  • Bit_score: 113
  • Evalue 1.30e-22
rpoE; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 77.0
  • Bit_score: 112
  • Evalue 6.40e-23
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25894.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 77.0
  • Bit_score: 112
  • Evalue 3.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 297
ATGGCCGAAGAACGAGAAACCGTCACCCGCACCCGCAGTCAGAAGGCCTCCAACCAGTACGAGGCCCTTCAGCAGATGAGTGATGAAGACCTCATGTCTCAGTTCCAGGCTGGGACCGTCGAGGCCTTCAACATCCTGGTGGACCGCTACTCGGACCGCCTCATGCAGTACCTCTACCGCTTCCTCGGCGACATGAAGCGGTGCGAGGACCTGTTGCATACACCATCGCCGGCAACCTCGCGCGCAGCGAGTACCGCAAGCGCAAGCGCCGCCGGATGCAGTCGATCCAGTCGGTGA
PROTEIN sequence
Length: 99
MAEERETVTRTRSQKASNQYEALQQMSDEDLMSQFQAGTVEAFNILVDRYSDRLMQYLYRFLGDMKRCEDLLHTPSPATSRAASTASASAAGCSRSSR*