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sw_6_scaffold_14309_1

Organism: SW_6_Salinibacter_ruber_64_10

partial RP 24 / 55 MC: 2 BSCG 23 / 51 ASCG 6 / 38
Location: 3..1181

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor n=1 Tax=Salisaeta longa RepID=UPI0003B65135 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 223.0
  • Bit_score: 322
  • Evalue 7.50e-85
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 219.0
  • Bit_score: 310
  • Evalue 8.30e-82
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ABC45404.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 219.0
  • Bit_score: 310
  • Evalue 4.10e-81

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1179
GGCGGTGGGGGAGAAGACGACGACCGCGAGAAGCCGATGCGCGCGACCTCCACCATCGGCGAAGACCTGCGCGACCAGCTCACCTTCTCGGACCTCAGCGAAGAGGACGAGCTGATCGCCGACCAGATCATCGGCTCCATCGACGAGGACGGCTACCTGCGCCGTTCCGTCGAGTCGATCTTGGACGACGTGCTCTTCAACCACGGCATCGAGCTGGCCGAGGAGGACGTCGAGCGCGTCCTGCGGCAGATCCAGCAGCTCGACCCGGTCGGCATCGCCGCGCGCGACCTCCAGGAGTGCCTGCTTTTGCAGCTGGAACACCTGCCGGAAGACACTACCGGGCGCGACGTGGCCGTGGAGATGCTGCGCGACCACTACGAGGCGTTCACCATGAAGCACTTCGGCAAGCTCGCCAAGCGCCTCGGCGTCTCCGACGCTCGTCTTAAAGACGCCTTCGATCTGGTCAAGGAGCGCCTCGATCCCAAGCCCGGCGAGGGCTCGTTCACCGCGCAGGAAAATTACATCACGCCGGACTTCACGGTGCGCTGGGTAGACGGGGAATTCGTCATCTTGCTCAACGGGCGCAACGCCCCGAAGCTGCACATCTCCAAGCAGTACCGCAAAATGCTCGAAGAGCTCTCGGCTGAGCAAAAGAAGCGCCAGAAGCAGCAGCAAAACGGGGCCCCGTTCGCCGGCGACGACGCCACGCCCGACGTAGCCGGTGCCGCCGCTGAAAGAGAAGAAGAAGAAGACGGCGCTTCCGGCAAGGTCCCTTCGGGGGCGCCGTCCCGAGGTAACGGCCCGCTCACTCAGGAGGGCGTGGATGAGGAGACCCGCGACTTCCTCAAAGACAAGTTCGACTCCGCGCGCTGGTTCATCAACTCGATCAACCAGCGCCGCCACACCATGACGATGGTCATGGACGCCATCGTGCAGGAGCAGGAAGACTTTTTTCGCCACGGGCCGGGCCACCTCAAACCGATGATTCTCAAAGACATCGCCGAGATCATCGAGATGGACATCTCCACGGTCAGCCGGGTGGTCAACGGCAAGTACGTGCAGACCGAGTGGGGCGTCTACGAGTTGAAGTATTTTTTCAGCGAAGGGTTGGAGACGGAAAGCGGCGAAGAGGTTTCCAATAAAGAAGTCAAAGCCATCCTCCAGCAGGTCGTCGACGAG
PROTEIN sequence
Length: 393
GGGGEDDDREKPMRATSTIGEDLRDQLTFSDLSEEDELIADQIIGSIDEDGYLRRSVESILDDVLFNHGIELAEEDVERVLRQIQQLDPVGIAARDLQECLLLQLEHLPEDTTGRDVAVEMLRDHYEAFTMKHFGKLAKRLGVSDARLKDAFDLVKERLDPKPGEGSFTAQENYITPDFTVRWVDGEFVILLNGRNAPKLHISKQYRKMLEELSAEQKKRQKQQQNGAPFAGDDATPDVAGAAAEREEEEDGASGKVPSGAPSRGNGPLTQEGVDEETRDFLKDKFDSARWFINSINQRRHTMTMVMDAIVQEQEDFFRHGPGHLKPMILKDIAEIIEMDISTVSRVVNGKYVQTEWGVYELKYFFSEGLETESGEEVSNKEVKAILQQVVDE