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sw_6_scaffold_3343_6

Organism: SW_6_Salinibacter_ruber_64_10

partial RP 24 / 55 MC: 2 BSCG 23 / 51 ASCG 6 / 38
Location: 3609..4229

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 206.0
  • Bit_score: 275
  • Evalue 4.20e-71
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 206.0
  • Bit_score: 275
  • Evalue 6.00e-71
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 206.0
  • Bit_score: 275
  • Evalue 1.20e-71

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 621
ATGTCGGATCCGGTGGATGCTCCGTCGGGCCGCCTGCTGAGCGCCCTGGGCGATAGGCTAAGAGGAAAGGAAAGTCGTTTCCGAAAGAACCTGCTTAGCAAGCGCGTCGACTATTCGGGGCGCTCGGCCATTGTGCCTGGGCCTCGTCTTGAGCTCCATCAGTGCGGCCTTCCGAAAGAGATGGCAGCGGAGCTTTTCAAACCGTTCATTGTCCGTCGCCTCATGGCTGAGGGCGCCGTGGAAACGGCGGAAGAGGGGCAGAAATACGTGGATGGGAAGACGGAGGATGTATTGGCTGTCTTAGAGGAAGTGGTTCAGAGGCGACCGGTACTGCTCAGCCGCGGGCCCAAAATTGATCAACTCGGCATCTGGGCCTTCCGTCCGGTCCTGAGCGACGGCAAGGCCATTGAGCTACACCCGCTCGCATGCCCAATCGACAACGCGGGGTTCGACGGGGATGGATTGTTCGTACACGTGCCCCTCAGCTACGAGGCTGCCTGCGAGAGCATGGCGCTCATGTCGAGCAGCAATCACCTTCGGAGTCCGGCGGACGGCGGTCCAAATGTGATACCAAGCCAGGACATAATTTTTGGTCTCTACTACCTCACGAAGGCCAAGTCC
PROTEIN sequence
Length: 207
MSDPVDAPSGRLLSALGDRLRGKESRFRKNLLSKRVDYSGRSAIVPGPRLELHQCGLPKEMAAELFKPFIVRRLMAEGAVETAEEGQKYVDGKTEDVLAVLEEVVQRRPVLLSRGPKIDQLGIWAFRPVLSDGKAIELHPLACPIDNAGFDGDGLFVHVPLSYEAACESMALMSSSNHLRSPADGGPNVIPSQDIIFGLYYLTKAKS