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sw_6_scaffold_4929_2

Organism: SW_6_Salinibacter_ruber_64_10

partial RP 24 / 55 MC: 2 BSCG 23 / 51 ASCG 6 / 38
Location: comp(1581..2141)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG02_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 186.0
  • Bit_score: 156
  • Evalue 2.60e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 186.0
  • Bit_score: 156
  • Evalue 7.30e-36
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY49491.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 186.0
  • Bit_score: 156
  • Evalue 3.60e-35

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Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGAAAGAGCAAGAGCGCGACTGGGTTGAGCGCACGCGTGCGGGGGATGAGGAAGCGTTTCGGGAGATGTTTCAGGCGTACTTCCCGAAACTATGCGGGTTTGCTGCAGACTACATCGACTCTGTGGATCAAGCCCGAGACCTCGTGCAGGACGTATTCCTGAAGATCTGGGATCGCCGGGAGAATTGGACAGTGCGCACCTCCCTGCGCTCATACCTCTATCAGGCCGTCAAAAACCGGGCGCTGAACGAAATTCGTCGGACGACTTCTGAGCAGGAAGCGGAAGATTTTCTTGAGTACACCGAGCCGACGTCAGACTCACGGACAGCAGCGGACACCTTTCACATGGAGGCCCTATCGGAGAACATTGAATCGGCCATTTCCCAACTCCCTGATCGTCGACGGCGTGCCTTTCTCCTGCACCGCCGTCATGGGTTTACGTACAAAGAAATCGCCCAGATCATGGACATCTCTCCGAAGACCGTAGAGAATCACATCGGCCGGGCGCTCAAGTCTCTCCGGAAGCAGCTTGTGGACCAGTTCCCCCGCGAACTGGAGTAG
PROTEIN sequence
Length: 187
MKEQERDWVERTRAGDEEAFREMFQAYFPKLCGFAADYIDSVDQARDLVQDVFLKIWDRRENWTVRTSLRSYLYQAVKNRALNEIRRTTSEQEAEDFLEYTEPTSDSRTAADTFHMEALSENIESAISQLPDRRRRAFLLHRRHGFTYKEIAQIMDISPKTVENHIGRALKSLRKQLVDQFPRELE*