ggKbase home page
Advanced Search
Search Help

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_6_scaffold_1413_3

Organism: SW_6_Salinibacter_ruber_63_39

partial RP 8 / 55 MC: 1 BSCG 9 / 51 ASCG 6 / 38
Location: 2750..6532

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
nrdB; ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=24657145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 544.0
  • Bit_score: 1011
  • Evalue 6.60e-292
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ABC45612.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ABC45612.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidete similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 543.0
  • Bit_score: 1011
  • Evalue 9.20e-292
ribonucleoside-diphosphate reductase similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 543.0
  • Bit_score: 1011
  • Evalue 1.90e-292

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3783
ATGTCCCAGAAATCCTCCTCGCCACCGGAATCTTCGTCGGCCGATGTCGCCACCTCTCCCCAGGAATCCACCGATGGACACGCCTCCAACGGGATTAGTGTCGCCACCCGGTCGGCCAAAAATGGATCGCATCAGTATTCGCTCTCGGAAAGCGACCTCACTACGGACGACCGCACGAACGAGGACATCTTCGAGACCGACATCTCGGAAGAGGTCTACGAGCAGAACTATCAGTACGGCACCGACGACCGCGTGCCGGATACGTGGTACCGCAATGCGCGGGCCATGGCGTCGGTCGAAGACGACGTTGAGCTCTGGACGCAGCGCTTCTATCAGCTTCTGAGCGGCAAGGGGCTGGACACCGGTCCGTTTCCCTTCACCCCCGGCGGCCGCATCTTTGCCAACGCGGGGACCGGCCTGGGCAAAGCCACGCTAATTAACTGTTTTGTCAGTGGTTTTCAGGGCTATGACCGGGACTCGATGGACGAGATCCAGGCGGAGCTCACCCGTCAGGCCAAGATCCTTGCCAGTGAGGGCGGCTATGGCTTCTGCGCCCACGTGATGCGTCCTCGCGGCGCCCGCATCGGCGGGGTCGGCTCCATGACGCCCGGCGCCGTCCAGATGCTCGACGTCTGGAATAAGCAGGCGGCCACCATCGTGGCCGGCTCCGGCATGAAATCCGACCGCGACGACGTGAAGGACAAGATCCGGAAGGGCGCCCAGATGGTGACGATGGGCATTTGGCACCCCGACGTGATCGAGTTTATCGAGGCGAAGCAGGAGCCCGGGCGCCTCCACAAGTTCAACATGTCGGTGCTCGTCACCGACGAGTTTATGGACGCGGTGCGGAACGACGACACATGGGCGCTCCGGTTCCCCGACTACGAGAACGAAAAAGAATTCTACAAGGAGCACTGGGACGGCAACTTGAAGGCCTACCAGGAGAAGGGCGGCACCGTGAAGACGTGGAAGGATCCGGCCACTGGCGAGCCCGCGGTCTACGAGGCGCGGGAGATCTGGAATCGGATCATGGATTCCACCTACAATCGCAACGAGCCCGGTGTCATCTTCGTCGACACCATCAACAAGGAAAACAATCTCAACTACGTCGAGCACATCAACGCGACGAACCCGTGCGTGGCCGAAGGCACGCTCGTGAACACACCGGACGGATACGAGCGCGTCGAAAACATCTCCGTTGGCGACACGATTCTCACGACCATTGGCCACGAGCCGGTCGACGAGATTGAAGTGCACCGGAACTATCCGGTGTATCGCGTCCGGTTCAGCGATGGTGGCGAGCAGTTGGTAACGGCTGCGCACCGCTATCACGTGAAGGAGTCCGGTGCAAAGTCGGTGACGGACAAGCGCCTCGACGAAATTGAGGAGGGAGCCACGATTCGTGTGCGCGGCAACCATCAGCCGCTGGACCTCGATGAGTCCGCCTATGGGCGCGGCCTGAAGAAGGGAATATTGGTTGGCGATGGATGCTACACAGAGGCAGCTCTCGCCTCGCACAATCGAGATGCGCTCGCCATCAGCAGCTCCACGTCCGACACCGGCTACAATGAAAATGTCCAGACCCTCTTCGGGACCGACCACGGCCTCGACACCTCCTCGGAAGGCAAGGCCGTAAAGATCTGGGTCACGGACGCCCAAGATCTCGTCGAGAAATTGGACCTGAATCAGGCGAAGGCCCCCTCGAAGACGGTGGACGTCGCGTCGATGACGCGCTCCGAGATGCTGGGCGCACTCGATGGACTGATTGCCTCCGACGGCAATATGAACCTGAAGAGTAATCATCCGCAGCTCCGGTTCATGACGACTTCGGAGGAGCTCGCGCGAGACGTTCGCCAGATGATGCTCGCGTTCGGTGCTCACGCCACGATCAATGATAGTGCTCCCCCGCGTTCCACGATCAACGGGCGGGAGATTGAGGGCAGTCACACGAAGTATACAGTACAGGTAAGTGGGGAGTCGCTTCGTAACTTCGCCCAACACAGTCGCCTGGAAGAAATTCATCCCGAGAAGGGAGAGCGTCTTCTCAGGGCACAGACCGATTTCCTACTCAGCGGCAACTACTGGTGGGCGAAGATCGAGTCGATCGAGGAGGCGGGCACGGCGGACGTATACGACCTCTATTGCGAGAAGAGCGATACCTGGATTACCTCCGGGTACGTACAGCGCGGCTGTGGCGAGCAGGTCCTCCCCGTTGGCGGCGTCTGCCTGCTGGGCAACCTGAACGTGACGCAGCTCGTGGACCGGGAGGCTGGCGAGATCAACTACGACCTCCTCGACGACCTCGTCCCCCTGGCGGTGCGGTTCCTCGACAACGTCAACGACCTGAGCTACGTCCCCCTGGAGGAGCAGCAGCGCAACCTGCAGGAGAAGCGCCGCATCGGCCTCGGCCACTACGGCGACGGCTCGGCCCTCATGATGATGAAAAAGCGCTACGGCTCCGACGAGGGCGCCCGCGTGATGCGGACGTTCCAGGAGCACCTCGCCAACCGGGCCTACCAGGCCAGCGCGCGCCTCGCCGATGAGAAGGGGGCGTTCCCGCTGTTCGACAAGGACGAGTACCTCAGCAGTCCCTTCGTGCAGCGCCTCTCAGACAAGACGAAGGAAATGATCGGCGACCTGGGCCTTCGGAACAGCCACCTGCTCTCCATTCAGCCGACGGGCAATACGTCCACACTGGGCAACGCGCCGTCGAGCGGCATCGAGCCGGTGTTCATGCACAGCTACATTCGCACATCCGAACAGCCGGCCCTGCCCGAAGGCATCAATCGCCCACCGATGTCCCCCGGCGCCTACGAGGTGGGGCAGGACATCGACGCCGACGGGACGGCCTGGACCGCGGAGGAGCAGGGCGATGAGACGGTGCTCCGCTGCCGGGAAGAGGGCTACACCCACTGGCAGATTCATCCCACGCGCGACATCTGCAAGGACCAGGAGGTAAAAGACTACGCCGTCCGCCACATGGAGCAGGCCGGCGACTGGGACCCGGAGGCCGACTGGGCTGTCACGACCCGCGACCTGGACGTGGACGACCACCTTACGCAGATGAAGGCGCTGGCACCCTTTGTGGACAGCTCCATGAGCAAGACGGTGAACGTCCCGCAGGACTATCCCTTTGAGGACTTCAAGGAACTCTACAAGAAGGCCCACGACACGGGCGTCATCAAAGGCGTCACCACCTACCGCGCCGGCACCATGAGCGCGGTGCTCTCCGGCGACGAGGCGGACGAGCAGACCGTGCCCCGCACCGAGGCGCCCGACCGCCCAGAGACCCTGCCGTGCGCCGTCCACCGCGTGCGGTACCGCGGCGATCACTGGACGATTCTCGTCGGCTTCCTTGAGGACGCCCCCTACGAGATCTTCGCCTTCAAGTCAGAGGGTGAGGCCCCGCTTTTTGGCGACGACCAGGAGCGGGTCGACGAAGGACACATTCGGAAGAACGAGAGCCGGCACTACTCCCTGCTCGGCCCCGACGAGGAGGTGGTGATCGAGGACATCACCAGCCACATGCCGTCAGACGAGGTGCGCGAGCAGACGCGACTCGTCTCCACGGCGCTCCGCCACGGCTCACGGATCGACTTCCTCGTGGAGCAGCTGGAGAAGGCCGAGGGCTCGATCGCTTCGTTCGGTCGGTCCATGGCGAAGGCCCTCAGCGCCCATGCCACCAACCACGAGCTGACCTGCGACAAGTGCGGCTCCTCGAACGTGCGGCACGTGGAGGGCTGCATGGAGTGCGCGGACTGCGGACACTCCCGGTGCAGCTGA
PROTEIN sequence
Length: 1261
MSQKSSSPPESSSADVATSPQESTDGHASNGISVATRSAKNGSHQYSLSESDLTTDDRTNEDIFETDISEEVYEQNYQYGTDDRVPDTWYRNARAMASVEDDVELWTQRFYQLLSGKGLDTGPFPFTPGGRIFANAGTGLGKATLINCFVSGFQGYDRDSMDEIQAELTRQAKILASEGGYGFCAHVMRPRGARIGGVGSMTPGAVQMLDVWNKQAATIVAGSGMKSDRDDVKDKIRKGAQMVTMGIWHPDVIEFIEAKQEPGRLHKFNMSVLVTDEFMDAVRNDDTWALRFPDYENEKEFYKEHWDGNLKAYQEKGGTVKTWKDPATGEPAVYEAREIWNRIMDSTYNRNEPGVIFVDTINKENNLNYVEHINATNPCVAEGTLVNTPDGYERVENISVGDTILTTIGHEPVDEIEVHRNYPVYRVRFSDGGEQLVTAAHRYHVKESGAKSVTDKRLDEIEEGATIRVRGNHQPLDLDESAYGRGLKKGILVGDGCYTEAALASHNRDALAISSSTSDTGYNENVQTLFGTDHGLDTSSEGKAVKIWVTDAQDLVEKLDLNQAKAPSKTVDVASMTRSEMLGALDGLIASDGNMNLKSNHPQLRFMTTSEELARDVRQMMLAFGAHATINDSAPPRSTINGREIEGSHTKYTVQVSGESLRNFAQHSRLEEIHPEKGERLLRAQTDFLLSGNYWWAKIESIEEAGTADVYDLYCEKSDTWITSGYVQRGCGEQVLPVGGVCLLGNLNVTQLVDREAGEINYDLLDDLVPLAVRFLDNVNDLSYVPLEEQQRNLQEKRRIGLGHYGDGSALMMMKKRYGSDEGARVMRTFQEHLANRAYQASARLADEKGAFPLFDKDEYLSSPFVQRLSDKTKEMIGDLGLRNSHLLSIQPTGNTSTLGNAPSSGIEPVFMHSYIRTSEQPALPEGINRPPMSPGAYEVGQDIDADGTAWTAEEQGDETVLRCREEGYTHWQIHPTRDICKDQEVKDYAVRHMEQAGDWDPEADWAVTTRDLDVDDHLTQMKALAPFVDSSMSKTVNVPQDYPFEDFKELYKKAHDTGVIKGVTTYRAGTMSAVLSGDEADEQTVPRTEAPDRPETLPCAVHRVRYRGDHWTILVGFLEDAPYEIFAFKSEGEAPLFGDDQERVDEGHIRKNESRHYSLLGPDEEVVIEDITSHMPSDEVREQTRLVSTALRHGSRIDFLVEQLEKAEGSIASFGRSMAKALSAHATNHELTCDKCGSSNVRHVEGCMECADCGHSRCS*