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sw_6_scaffold_15252_1

Organism: SW_6_Salinibacter_ruber_63_39

partial RP 8 / 55 MC: 1 BSCG 9 / 51 ASCG 6 / 38
Location: 3..395

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659133 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 125.0
  • Bit_score: 219
  • Evalue 2.30e-54
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 125.0
  • Bit_score: 219
  • Evalue 3.20e-54
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 125.0
  • Bit_score: 219
  • Evalue 6.40e-55

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCCGTGGTGCCGGAGGAGAACGGGAAGTGGGCCGTCACGCACTACGAAACCGTCGAGACCCACGCCCACACCTCCGTCGTCGACTTCCGGCTAGGAACCGGGCGCACTCACCAGATTCGCGTCCACGCTCGGGCGCAGGGCCATCCGCTTCTCGGGGATCCGAAGTACGGGGGACAGCGGGTGCGCTACGGGACCCAGAGTGAGGACCGACGGGCCTTCTTCGAGCACCTGTTCGAGGTCCTCCCGCACCCGGCGCTGCACGCATATCGCCTCGGATTTGCCCATCCCACCACGGACGAGGGCCTGCGTTTTGAGGCCGACCCACCGGCCGAGTGGCAGCGTGTGCTGGACCAGTTGCGGACCGACGACGGGCAAACCGGCCGTCGCTGA
PROTEIN sequence
Length: 131
MAVVPEENGKWAVTHYETVETHAHTSVVDFRLGTGRTHQIRVHARAQGHPLLGDPKYGGQRVRYGTQSEDRRAFFEHLFEVLPHPALHAYRLGFAHPTTDEGLRFEADPPAEWQRVLDQLRTDDGQTGRR*