ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_6_scaffold_4426_4

Organism: SW_6_Salinibacter_ruber_63_39

partial RP 8 / 55 MC: 1 BSCG 9 / 51 ASCG 6 / 38
Location: 3470..4408

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Q3_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 296.0
  • Bit_score: 255
  • Evalue 5.20e-65
transposase similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 296.0
  • Bit_score: 255
  • Evalue 1.50e-65
Transposase {ECO:0000313|EMBL:CBH24341.1}; Transposase, IS4 {ECO:0000313|EMBL:CBH23708.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 296.0
  • Bit_score: 255
  • Evalue 7.40e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 939
TTGCGATGCTGGGCAGCCTGCTTCTGCATTTGCTTCCGCAAACGCCCCCCTTACGAGGTGGTCATCGACCGCACGGAGTGGTACTTCGGGGAAACCGCCGTCAACATTCTCATGGTCGGCATTGCTCACGAGGGAATGGCCTTTCCGGTCGCTTGGACGGCTCTTTCGAGCGGGGGTAGTTCCGACCTGGAAGCGCAAACGGAGGTGCTGGAGCGTTTTCTCAAGATTGTCGACCCGGATTCGATTAAAGTGGTTACCGCGGACCGAGAATTTATCTCGGTTCCGTGGATGAGAAAGCTCGAAGATCGAGACATTCCGTTTGCCATCCGCCTGCGGTCGGACCGCCGGATTTGGAAATCGCCTGAGGGACCGTCGCTTCCGGCCCGGATGCACGCGCGAACGGTGGATCTCGGGAGTGAGCGAACATTGGAGGGGACGCGGTATCTTTCTGGAGCCCAGGAAGATGGAGCGGAAAAAGTGCTGGTTCCTGTAAGGATTGTAATCCGGCGAATCGGGGACGAAGACTCCGACGACCCGTTCCTCATCTTGGCTACTTCGAACGTCGATCCGGCCGAGGCTACGGAGCTGTACGAACAGCGGTGGGACATTGAAACCCTGTTTGCGGCCTTGAAGTCGCGGGGATTCGATCTTGAGGAGACGAAGGTAACCGATCCAGAAAAGGTTGAGAACTTGGTTGGCTTGCTGGCCCTGGCGTTCGGGTGGGTCCGCCTGGTCGGAGAGGAGCGGGCTGCCCGAGAGGGACCTCCCACGACCAAGTCCCACGGGCGAAAAGAGCGGAGCCTGTTTCGGTATGGACTGGACCGGCTGCAAAACATCTTCTCGACGCCGGAGCCGCAAGTTCAGGCGTTTTTGCGATGTTTGTCGCTGTTCCGCAGTCCTTCGGCGTTTGTGGCAGGCGGGTCGGCTGCTACGCTTTGA
PROTEIN sequence
Length: 313
LRCWAACFCICFRKRPPYEVVIDRTEWYFGETAVNILMVGIAHEGMAFPVAWTALSSGGSSDLEAQTEVLERFLKIVDPDSIKVVTADREFISVPWMRKLEDRDIPFAIRLRSDRRIWKSPEGPSLPARMHARTVDLGSERTLEGTRYLSGAQEDGAEKVLVPVRIVIRRIGDEDSDDPFLILATSNVDPAEATELYEQRWDIETLFAALKSRGFDLEETKVTDPEKVENLVGLLALAFGWVRLVGEERAAREGPPTTKSHGRKERSLFRYGLDRLQNIFSTPEPQVQAFLRCLSLFRSPSAFVAGGSAATL*