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sw_6_scaffold_5180_3

Organism: SW_6_Salinibacter_ruber_63_39

partial RP 8 / 55 MC: 1 BSCG 9 / 51 ASCG 6 / 38
Location: comp(1020..1568)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=309807 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 181.0
  • Bit_score: 224
  • Evalue 1.10e-55
2'-5' RNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S292_SALRD similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 181.0
  • Bit_score: 224
  • Evalue 7.60e-56
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 181.0
  • Bit_score: 224
  • Evalue 2.10e-56

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 549
ATGCGACTGTTCACGGCAATCGACATCCCCGACTCGCTCCGCAACGACCTTGCGGCCCTCCAGGACGCAGACGCATCGGCGGTCCGGTGGAGCGACCCGGAGCAGTTTCACGTAACCCTCCGGTTCATCGGCGACGTGAGCGAGGAGCCGTCCCGACGGCTATCGGGGTACGAGGAGGTCCTCGGAGAGGTGGATGTGGCACCGGTCCGATGCAGGCCCTATGGGCTGGACGTGCTCCCCTCCCGCCGCTCGCCCCGCGTGCTGATGCTGGGACTGGAGCGCACCGACTCGATGATGGCGCTCTACAATGCGGTCAGCGACGCGCTCGAAGCGGAGGGCCTTGCCCCCGAGGATCGCACATACCGGCCGCACGTCACCATCGCTCGTCTCGACGACGCCGACCGGGATGCGGTTCACGATTTCCTCCGTGCCCACAGCAACCAGTCGTTCCCAACCTTCGAGGCCGAGCAGTTCGTGCTCTACGAGAGCACTCGGACGCCGGATGGAGCAATTCACGAACCGCTGGCCTCCTATCCCCTCCGTCCCTGA
PROTEIN sequence
Length: 183
MRLFTAIDIPDSLRNDLAALQDADASAVRWSDPEQFHVTLRFIGDVSEEPSRRLSGYEEVLGEVDVAPVRCRPYGLDVLPSRRSPRVLMLGLERTDSMMALYNAVSDALEAEGLAPEDRTYRPHVTIARLDDADRDAVHDFLRAHSNQSFPTFEAEQFVLYESTRTPDGAIHEPLASYPLRP*