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sw_6_scaffold_10152_2

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 1336..1605

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix Fis-type n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1Z8_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 79.0
  • Bit_score: 86
  • Evalue 1.20e-14
helix-turn-helix Fis-type similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 79.0
  • Bit_score: 86
  • Evalue 3.40e-15
DNA-binding protein Fis {ECO:0000256|SAAS:SAAS00253269}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus haloph similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 79.0
  • Bit_score: 86
  • Evalue 1.70e-14

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Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGAACCGCGCCGGCGACTGTGAGTGCGACGATCGCCCGGAGACACCGCTCAAGCGTTGTGTCCACGACGAGCTTGAGCATTACTTCGAGGCCCTCGAGGGCGAGAGCCCGGTTGATCTGCACAAGATGGTCGTGGGTGAGACCGAGCAAGCATTGCTACACTTCGTGCTCCAGCGCACCGGCGGCAACCAGAGCCGGGCGGCCCAGCTACTCGGCCTCAATCGGGCCACTTTGCGTAAAAAGTTACGCCACTACGGCCTGACCCCCTGA
PROTEIN sequence
Length: 90
MNRAGDCECDDRPETPLKRCVHDELEHYFEALEGESPVDLHKMVVGETEQALLHFVLQRTGGNQSRAAQLLGLNRATLRKKLRHYGLTP*